Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PLCE1P1-201ENST00000622094 305 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC006504.1-201ENST00000562493 3666 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 snoZ40.1-201ENST00000364540 72 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 SNORD116.1-201ENST00000365628 92 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC119751.3-201ENST00000399720 670 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 ERHP2-201ENST00000402323 299 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 RAB28P1-201ENST00000411517 641 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC107081.1-201ENST00000414975 361 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 RPL21P32-201ENST00000419877 477 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC245054.1-201ENST00000420944 258 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC019178.2-201ENST00000423595 505 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 RPL7P34-201ENST00000433316 712 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 NEK4P1-201ENST00000433383 879 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 MTCYBP34-201ENST00000439552 670 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 SSXP4-201ENST00000451349 245 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 MTCO3P11-201ENST00000455103 774 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 SUMO2P2-201ENST00000456482 255 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 USP9YP25-201ENST00000457708 443 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 RNU7-170P-201ENST00000459303 61 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 RNU6-1225P-201ENST00000516336 65 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 RN7SKP21-201ENST00000516503 220 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AP001804.3-201ENST00000525146 880 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 UBTFL10-201ENST00000528532 562 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC023050.2-201ENST00000544968 387 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 FAM60BP-201ENST00000578364 658 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 VN1R83P-201ENST00000595685 445 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 NIFKP6-201ENST00000598115 845 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC004987.4-201ENST00000603383 338 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 AC024257.5-201ENST00000612739 531 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM5Q96HC4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.59□□□□□ -1.84
PDLIM5Q96HC4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.59□□□□□ -1.84
PDLIM5Q96HC4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 RPL7P26-201ENST00000333817 754 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 RNU5D-1-201ENST00000363299 116 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AL591034.1-201ENST00000407447 340 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 RN7SKP156-201ENST00000410308 342 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 ELOCP9-201ENST00000418624 239 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 HMGB1P49-201ENST00000418882 569 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC010099.3-201ENST00000423896 409 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 BMS1P19-201ENST00000433925 393 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 MUPP-201ENST00000438111 566 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC010655.1-201ENST00000449336 292 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 BTF3P5-201ENST00000457252 467 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC026410.2-201ENST00000460281 156 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 RPS27AP1-201ENST00000475545 471 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC017015.1-201ENST00000477387 286 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AL049830.2-201ENST00000480072 201 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC026402.1-201ENST00000513642 170 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 DUXAP6-201ENST00000553858 601 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 HSPE1P5-201ENST00000561489 272 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 LARP7P2-201ENST00000575306 125 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 MIR5685-201ENST00000579080 79 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 MIR4738-201ENST00000579134 87 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 MIR4637-201ENST00000582405 84 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 VN1R78P-201ENST00000597393 564 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC244505.7-201ENST00000599675 272 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC067959.1-201ENST00000604334 379 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AL031176.1-201ENST00000604554 466 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC106028.5-201ENST00000610332 395 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AL356585.4-201ENST00000623078 1229 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms