Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SNRPFP1-201ENST00000414761 252 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 RAC1P3-201ENST00000416129 580 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 MTND3P17-201ENST00000416968 344 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AC234779.1-201ENST00000425910 285 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.03□□□□□ -1.6
ERCC4Q92889 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.03□□□□□ -1.6
ERCC4Q92889 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.03□□□□□ -1.6
ERCC4Q92889 AL049745.1-201ENST00000433953 286 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 MTND5P20-201ENST00000448677 143 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 MTND2P24-201ENST00000453434 806 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.03□□□□□ -1.6
ERCC4Q92889 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.03□□□□□ -1.6
ERCC4Q92889 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC4Q92889 AC079804.1-201ENST00000461922 436 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AC087879.1-201ENST00000474343 374 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AC104563.1-201ENST00000476147 376 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 RBM43P1-201ENST00000476891 1081 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 FTH1P24-201ENST00000503502 462 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.03□□□□□ -1.6
ERCC4Q92889 PPBPP1-201ENST00000510807 373 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.03□□□□□ -1.6
ERCC4Q92889 SNORD116-26-201ENST00000516006 96 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 RNA5SP154-201ENST00000516193 111 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.03□□□□□ -1.6
ERCC4Q92889 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.03□□□□□ -1.6
ERCC4Q92889 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.03□□□□□ -1.6
ERCC4Q92889 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.03□□□□□ -1.6
ERCC4Q92889 MIR4737-201ENST00000583979 81 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.03□□□□□ -1.6
ERCC4Q92889 AC025946.2-201ENST00000603398 234 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 Z98200.1-201ENST00000607298 470 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.03□□□□□ -1.6
ERCC4Q92889 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ERCC4Q92889 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC4Q92889 CPHL1P-201ENST00000461341 3407 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ERCC4Q92889 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ERCC4Q92889 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC4Q92889 MTND5P28-201ENST00000438005 1594 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AL049780.3-201ENST00000624612 1583 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
ERCC4Q92889 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ERCC4Q92889 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ERCC4Q92889 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.02□□□□□ -1.61
ERCC4Q92889 ERCC6-202ENST00000374127 1782 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 GNG5P1-201ENST00000255500 204 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ERCC4Q92889 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ERCC4Q92889 RNA5SP391-201ENST00000363456 119 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ERCC4Q92889 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 MTND4LP20-201ENST00000402379 270 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.02□□□□□ -1.61
ERCC4Q92889 RNU6-195P-201ENST00000411352 109 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.02□□□□□ -1.61
ERCC4Q92889 BX510359.2-201ENST00000417920 305 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 NANOGP6-201ENST00000429190 847 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 USP9YP9-201ENST00000429406 715 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.02□□□□□ -1.61
ERCC4Q92889 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ERCC4Q92889 RPL23AP43-201ENST00000446445 471 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AC104073.1-201ENST00000451988 151 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AC099563.1-201ENST00000456086 418 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AC104057.1-201ENST00000515547 497 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 Y_RNA.672-201ENST00000516289 104 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 CDH12P4-201ENST00000517835 295 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 CDH12P3-201ENST00000517935 295 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 CDH12P1-201ENST00000518435 295 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC022861.1-201ENST00000522981 663 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AP001646.1-201ENST00000527936 915 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.02□□□□□ -1.61
ERCC4Q92889 CENPUP2-201ENST00000555897 1186 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC245014.2-201ENST00000603689 287 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AC246785.4-201ENST00000605374 287 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 RNU6-87P-201ENST00000607561 108 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AL138721.1-201ENST00000616756 179 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 AC104985.2-201ENST00000620598 500 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.02□□□□□ -1.61
ERCC4Q92889 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.02□□□□□ -1.61
ERCC4Q92889 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC073544.1-201ENST00000600110 1595 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC007529.1-201ENST00000418574 2178 ntBASIC5.02□□□□□ -1.61
ERCC4Q92889 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
ERCC4Q92889 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ERCC4Q92889 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
ERCC4Q92889 AC011266.1-201ENST00000624119 3569 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms