Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.35□□□□□ -1.55
PHC3Q8NDX5 CR383656.7-201ENST00000548164 174 ntBASIC5.35□□□□□ -1.55
PHC3Q8NDX5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 AC026464.5-201ENST00000562497 722 ntBASIC5.35□□□□□ -1.55
PHC3Q8NDX5 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 AC020910.2-201ENST00000603635 610 ntBASIC5.35□□□□□ -1.55
PHC3Q8NDX5 AC133644.2-201ENST00000608142 540 ntBASIC5.35□□□□□ -1.55
PHC3Q8NDX5 AC000068.2-201ENST00000608816 460 ntBASIC5.35□□□□□ -1.55
PHC3Q8NDX5 AL133215.3-201ENST00000609801 448 ntBASIC5.35□□□□□ -1.55
PHC3Q8NDX5 AC109583.2-201ENST00000617367 129 ntBASIC5.35□□□□□ -1.55
PHC3Q8NDX5 AP001273.1-201ENST00000624493 3152 ntBASIC5.35□□□□□ -1.55
PHC3Q8NDX5 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
PHC3Q8NDX5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AL672167.1-205ENST00000641112 3080 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 RNU5E-6P-201ENST00000365574 115 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 RNU6-831P-201ENST00000384548 107 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 RNU6-754P-201ENST00000391166 107 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AL109755.1-201ENST00000401791 649 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 RNU2-36P-201ENST00000410361 191 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC005094.1-201ENST00000440420 368 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 PPIAP3-201ENST00000450588 505 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC234775.1-201ENST00000454247 670 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 RN7SL447P-201ENST00000494711 245 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC135721.1-201ENST00000497954 479 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 FAM206BP-201ENST00000510179 541 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 TTC39CP1-201ENST00000512513 755 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 SCARNA16.4-201ENST00000516956 187 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 HMGB1P19-201ENST00000517578 577 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 BNIP3P22-201ENST00000593399 556 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AL022099.1-201ENST00000604551 712 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 MIR6768-201ENST00000610734 72 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 MIR6886-201ENST00000619864 61 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 C2orf27A-204ENST00000623058 969 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 BMS1P21-201ENST00000634565 365 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 AC074101.1-201ENST00000637861 241 ntBASIC5.34□□□□□ -1.55
PHC3Q8NDX5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHC3Q8NDX5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PHC3Q8NDX5 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.56
PHC3Q8NDX5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
PHC3Q8NDX5 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
PHC3Q8NDX5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PHC3Q8NDX5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 ASNSP1-201ENST00000518311 1939 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 RN7SKP162-201ENST00000363605 345 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 RNA5SP223-201ENST00000365174 120 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 RNU6-1013P-201ENST00000384180 107 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 Y_RNA.493-201ENST00000384422 102 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 Y_RNA.530-201ENST00000384587 101 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 SNORA48.4-201ENST00000391089 134 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 AL133388.1-201ENST00000404509 287 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 AL391361.1-201ENST00000405580 489 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 RN7SKP229-201ENST00000410465 302 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 RNU2-47P-201ENST00000410649 186 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 RN7SKP159-201ENST00000410657 292 ntBASIC5.33□□□□□ -1.56
PHC3Q8NDX5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.33□□□□□ -1.56
PHC3Q8NDX5 ELOCP18-201ENST00000434209 337 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms