Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 HIGD1AP6-201ENST00000521833 279 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 OR4A45P-201ENST00000529954 901 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC022080.3-201ENST00000544433 482 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC012254.4-201ENST00000588843 273 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC078899.3-201ENST00000599065 212 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC112503.2-201ENST00000609005 552 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 VIS1.1-201ENST00000610517 203 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC104307.1-201ENST00000616142 196 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC096644.4-201ENST00000563417 2912 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 AP003122.5-201ENST00000527668 3766 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ZIC4Q8N9L1 SNORA9.2-201ENST00000365361 133 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 RNU6-339P-201ENST00000384310 107 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 RNU6-851P-201ENST00000384565 107 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 RPL5P18-201ENST00000406671 891 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 RNU4-65P-201ENST00000410473 140 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 RAD23BP2-201ENST00000416003 1207 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 AL139132.1-201ENST00000431587 344 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 RAB11AP1-201ENST00000442978 646 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZIC4Q8N9L1 ARPC3P2-201ENST00000457786 533 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 snoU13.4-201ENST00000458916 104 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 AL136126.1-201ENST00000473603 402 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 AC006483.1-201ENST00000487308 313 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 AC083906.5-201ENST00000503722 328 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 OR8K4P-201ENST00000534608 872 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 AL109653.1-201ENST00000603091 248 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 AC005000.2-201ENST00000605468 310 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 AC004832.5-201ENST00000608677 401 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 AC091953.5-201ENST00000622919 233 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZIC4Q8N9L1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.57□□□□□ -2
ZIC4Q8N9L1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZIC4Q8N9L1 MTCO1P6-201ENST00000481192 1384 ntBASIC2.57□□□□□ -2
ZIC4Q8N9L1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZIC4Q8N9L1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZIC4Q8N9L1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZIC4Q8N9L1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC010733.2-201ENST00000589496 5702 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 GABRG2-229ENST00000641017 3628 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZIC4Q8N9L1 RNU1-35P-201ENST00000362782 153 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 RNVU1-3-201ENST00000364313 161 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 RNU6-1005P-201ENST00000384519 107 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 RNU6-441P-201ENST00000384545 106 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 UBA52P6-201ENST00000399822 382 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 MIR887-201ENST00000401258 79 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 RN7SKP58-201ENST00000411010 305 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 PAICSP7-201ENST00000419829 962 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 YWHAZP7-201ENST00000436906 631 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 HIGD1AP11-201ENST00000438361 280 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 NANOGNBP1-201ENST00000448444 480 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZIC4Q8N9L1 RPS26P21-201ENST00000475397 348 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC080014.1-201ENST00000496877 1201 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC004062.1-201ENST00000509926 645 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC107016.2-201ENST00000547968 190 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC095057.3-201ENST00000567102 1157 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC034268.2-201ENST00000571784 482 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC005951.1-201ENST00000576706 485 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AP001029.3-201ENST00000588063 596 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 HSPE1P14-201ENST00000605812 302 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC100814.1-201ENST00000606963 623 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms