Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 EEF1B2P3-201ENST00000447718 678 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AC022215.1-201ENST00000481770 362 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AC068781.1-201ENST00000488231 618 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 RNU4-77P-201ENST00000516692 156 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 CDH12P4-201ENST00000517835 295 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 CDH12P3-201ENST00000517935 295 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 CDH12P1-201ENST00000518435 295 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AL161713.1-201ENST00000555538 145 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 BDH2P1-201ENST00000602288 736 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AL499605.1-201ENST00000604628 403 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AC002044.1-201ENST00000606707 158 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AL021879.1-201ENST00000611756 288 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AC107871.2-201ENST00000612894 502 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AL138825.1-201ENST00000618587 192 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 CDC27P3-201ENST00000635418 1910 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AC024587.1-201ENST00000505925 2157 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AP001541.1-201ENST00000623322 1904 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 SNORD16-201ENST00000362803 99 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 RNA5SP85-201ENST00000365378 119 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-596P-201ENST00000365395 98 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-1329P-201ENST00000365664 107 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 U3.52-201ENST00000384034 216 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 RNA5SP122-201ENST00000384457 108 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AL590635.1-201ENST00000406314 586 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 SNORA11B-201ENST00000408175 129 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 SSXP9-201ENST00000417503 292 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 EIF4EP1-201ENST00000422311 642 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 RPL23AP50-201ENST00000434149 455 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AC112187.1-201ENST00000455837 479 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AC093870.1-201ENST00000506837 213 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AC008694.2-201ENST00000517591 306 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 HMGN2P28-201ENST00000606102 262 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 MIR15A-201ENST00000607334 83 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 MIR1910-201ENST00000636955 80 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 AL359955.1-201ENST00000455242 3275 ntBASIC5.72□□□□□ -1.49
DEPDC4Q8N2C3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
DEPDC4Q8N2C3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.71□□□□□ -1.49
DEPDC4Q8N2C3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
DEPDC4Q8N2C3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-238P-201ENST00000363313 106 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-842P-201ENST00000384269 107 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC097374.1-203ENST00000400783 485 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AL354868.1-201ENST00000417077 482 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 REREP1Y-201ENST00000422655 198 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 HMGB1P27-201ENST00000431429 603 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 KRT8P51-201ENST00000438938 274 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 REREP2Y-201ENST00000439103 200 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 PRDX3P3-201ENST00000447765 522 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 Z92846.1-201ENST00000456203 268 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 RPL22P13-201ENST00000493291 347 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-840P-201ENST00000517275 65 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms