Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.87□□□□□ -1.95
CXCL12P48061 AP001207.2-201ENST00000519490 539 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL12P48061 FAM60DP-201ENST00000524174 632 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AL442163.2-201ENST00000553912 710 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AL136520.1-202ENST00000555494 763 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.87□□□□□ -1.95
CXCL12P48061 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL12P48061 RNU6-156P-201ENST00000621869 107 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 PLCE1P1-201ENST00000622094 305 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 AC092608.2-201ENST00000624427 218 ntBASIC2.87□□□□□ -1.95
CXCL12P48061 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CXCL12P48061 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL12P48061 AC016716.1-201ENST00000265882 708 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 RNU6-1339P-201ENST00000363574 91 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 RNU6-609P-201ENST00000365459 107 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL12P48061 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL12P48061 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.86□□□□□ -1.95
CXCL12P48061 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL12P48061 MIR887-201ENST00000401258 79 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 UBE2D3P3-201ENST00000426992 425 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 ISCA1P2-201ENST00000438679 421 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 AC010095.1-201ENST00000443543 144 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 HMGB1P48-201ENST00000446155 598 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL12P48061 PTGES3P5-201ENST00000455109 434 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 RPL23AP44-201ENST00000482216 473 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 RPL31P13-201ENST00000484151 370 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 AC121161.1-201ENST00000510606 652 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.86□□□□□ -1.95
CXCL12P48061 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.86□□□□□ -1.95
CXCL12P48061 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.86□□□□□ -1.95
CXCL12P48061 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.86□□□□□ -1.95
CXCL12P48061 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.86□□□□□ -1.95
CXCL12P48061 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.86□□□□□ -1.95
CXCL12P48061 EIF5A2P1-201ENST00000564027 460 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 AC234778.2-201ENST00000566241 354 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 AC090312.2-201ENST00000582687 378 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 RN7SL622P-201ENST00000585292 275 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.86□□□□□ -1.95
CXCL12P48061 RPL21P136-201ENST00000605378 396 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 AC026741.1-201ENST00000605892 482 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 AC018754.1-201ENST00000607486 925 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 AC018926.3-201ENST00000618841 406 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.86□□□□□ -1.95
CXCL12P48061 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.86□□□□□ -1.95
CXCL12P48061 AC017104.5-201ENST00000637647 639 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 MTND5P24-201ENST00000438892 1767 ntBASIC2.86□□□□□ -1.95
CXCL12P48061 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.86□□□□□ -1.95
CXCL12P48061 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
CXCL12P48061 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.85□□□□□ -1.95
CXCL12P48061 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL12P48061 AC007256.1-201ENST00000392253 2765 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL12P48061 RNA5SP68-201ENST00000363885 119 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 AL138827.1-201ENST00000402666 306 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 PRRC2CP1-201ENST00000404428 159 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 RNU2-21P-201ENST00000410368 188 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 RPL7P8-201ENST00000411964 730 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 BX664727.1-201ENST00000416024 466 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL12P48061 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL12P48061 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CXCL12P48061 FABP5P3-201ENST00000437960 408 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 AC004865.1-201ENST00000442276 1003 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.85□□□□□ -1.95
CXCL12P48061 RPL32P14-201ENST00000463196 378 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 AC004801.2-202ENST00000463559 283 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL12P48061 AC126121.1-201ENST00000482313 553 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 AC112518.2-201ENST00000508565 425 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL12P48061 AC104108.1-201ENST00000509930 412 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 RNU6-237P-201ENST00000515985 71 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 RNU1-41P-201ENST00000516161 162 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 RNU1-48P-201ENST00000516400 162 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 RN7SKP82-201ENST00000516786 223 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL12P48061 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.85□□□□□ -1.95
CXCL12P48061 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL12P48061 PTP4A1P6-201ENST00000531034 478 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL12P48061 AP003717.3-201ENST00000544832 1180 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 MIR4425-201ENST00000580572 84 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 AP003117.2-201ENST00000606010 545 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 AL158211.2-201ENST00000607282 395 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CXCL12P48061 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 MTCO1P4-201ENST00000520516 1409 ntBASIC2.85□□□□□ -1.95
CXCL12P48061 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL12P48061 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL12P48061 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL12P48061 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL12P48061 AC116096.1-201ENST00000566804 2314 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.84□□□□□ -1.95
CXCL12P48061 AL512646.1-201ENST00000269395 1077 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 RNA5SP189-201ENST00000364920 115 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 370.9 ms