Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-353P-201ENST00000364266 108 ntBASIC2.68□□□□□ -1.98
CD74P04233 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD74P04233 RNU6-468P-201ENST00000384003 109 ntBASIC2.68□□□□□ -1.98
CD74P04233 RNU6-207P-201ENST00000384137 107 ntBASIC2.68□□□□□ -1.98
CD74P04233 RNU6-932P-201ENST00000391108 106 ntBASIC2.68□□□□□ -1.98
CD74P04233 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD74P04233 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.68□□□□□ -1.98
CD74P04233 AC069282.1-201ENST00000411911 526 ntBASIC2.68□□□□□ -1.98
CD74P04233 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.68□□□□□ -1.98
CD74P04233 AL035423.1-201ENST00000420331 213 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC104332.2-201ENST00000429959 156 ntBASIC2.68□□□□□ -1.98
CD74P04233 YWHAZP7-201ENST00000436906 631 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.68□□□□□ -1.98
CD74P04233 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CD74P04233 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.68□□□□□ -1.98
CD74P04233 AC010301.1-201ENST00000473936 355 ntBASIC2.68□□□□□ -1.98
CD74P04233 AP004217.1-201ENST00000480579 346 ntBASIC2.68□□□□□ -1.98
CD74P04233 GAPDHP39-201ENST00000481866 979 ntBASIC2.68□□□□□ -1.98
CD74P04233 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.68□□□□□ -1.98
CD74P04233 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
CD74P04233 AC004062.1-201ENST00000509926 645 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.68□□□□□ -1.98
CD74P04233 SNORA31.1-201ENST00000515993 133 ntBASIC2.68□□□□□ -1.98
CD74P04233 RN7SKP18-201ENST00000516005 275 ntBASIC2.68□□□□□ -1.98
CD74P04233 SNORA31.5-201ENST00000516190 133 ntBASIC2.68□□□□□ -1.98
CD74P04233 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.68□□□□□ -1.98
CD74P04233 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.68□□□□□ -1.98
CD74P04233 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.68□□□□□ -1.98
CD74P04233 BPTFP1-201ENST00000579209 492 ntBASIC2.68□□□□□ -1.98
CD74P04233 MIR3944-201ENST00000581277 108 ntBASIC2.68□□□□□ -1.98
CD74P04233 AL669831.4-202ENST00000590817 238 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC133794.1-201ENST00000602731 914 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC012119.1-201ENST00000603184 222 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC092574.1-201ENST00000609771 420 ntBASIC2.68□□□□□ -1.98
CD74P04233 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.68□□□□□ -1.98
CD74P04233 AL157817.1-201ENST00000614264 790 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC018926.1-201ENST00000616335 435 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC231759.1-201ENST00000616455 597 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC002076.2-201ENST00000617362 122 ntBASIC2.68□□□□□ -1.98
CD74P04233 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.68□□□□□ -1.98
CD74P04233 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.68□□□□□ -1.98
CD74P04233 AC068880.4-201ENST00000623082 495 ntBASIC2.68□□□□□ -1.98
CD74P04233 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CD74P04233 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.68□□□□□ -1.98
CD74P04233 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.68□□□□□ -1.98
CD74P04233 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD74P04233 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CD74P04233 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD74P04233 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CD74P04233 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CD74P04233 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CD74P04233 SNORA5A-201ENST00000384111 134 ntBASIC2.67□□□□□ -1.98
CD74P04233 MIR7-3-201ENST00000384898 110 ntBASIC2.67□□□□□ -1.98
CD74P04233 MIR887-201ENST00000401258 79 ntBASIC2.67□□□□□ -1.98
CD74P04233 AL355615.1-201ENST00000406187 641 ntBASIC2.67□□□□□ -1.98
CD74P04233 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.67□□□□□ -1.98
CD74P04233 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.67□□□□□ -1.98
CD74P04233 AC000041.1-201ENST00000439655 175 ntBASIC2.67□□□□□ -1.98
CD74P04233 AC002542.1-201ENST00000440683 193 ntBASIC2.67□□□□□ -1.98
CD74P04233 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.67□□□□□ -1.98
CD74P04233 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.67□□□□□ -1.98
CD74P04233 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.67□□□□□ -1.98
CD74P04233 AC104472.2-201ENST00000469035 601 ntBASIC2.67□□□□□ -1.98
CD74P04233 RPS17P11-201ENST00000474297 293 ntBASIC2.67□□□□□ -1.98
CD74P04233 AC015908.1-201ENST00000478739 476 ntBASIC2.67□□□□□ -1.98
CD74P04233 RPL7P23-201ENST00000493874 747 ntBASIC2.67□□□□□ -1.98
CD74P04233 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.67□□□□□ -1.98
CD74P04233 AC006499.5-201ENST00000505037 514 ntBASIC2.67□□□□□ -1.98
CD74P04233 AC016550.1-201ENST00000505348 785 ntBASIC2.67□□□□□ -1.98
CD74P04233 AC111000.2-201ENST00000507775 550 ntBASIC2.67□□□□□ -1.98
CD74P04233 KLHL2P1-201ENST00000508691 521 ntBASIC2.67□□□□□ -1.98
CD74P04233 AC109471.1-201ENST00000511631 612 ntBASIC2.67□□□□□ -1.98
CD74P04233 HMGN1P15-201ENST00000513870 295 ntBASIC2.67□□□□□ -1.98
CD74P04233 RNA5SP76-201ENST00000516277 87 ntBASIC2.67□□□□□ -1.98
CD74P04233 RNU1-95P-201ENST00000516357 160 ntBASIC2.67□□□□□ -1.98
CD74P04233 RNU1-128P-201ENST00000516704 160 ntBASIC2.67□□□□□ -1.98
CD74P04233 RNU6-56P-201ENST00000516986 93 ntBASIC2.67□□□□□ -1.98
CD74P04233 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.67□□□□□ -1.98
CD74P04233 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.67□□□□□ -1.98
CD74P04233 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.67□□□□□ -1.98
CD74P04233 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.67□□□□□ -1.98
CD74P04233 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
CD74P04233 AL391156.1-201ENST00000554965 554 ntBASIC2.67□□□□□ -1.98
CD74P04233 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.67□□□□□ -1.98
CD74P04233 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.67□□□□□ -1.98
CD74P04233 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.67□□□□□ -1.98
CD74P04233 AC024220.1-201ENST00000603675 484 ntBASIC2.67□□□□□ -1.98
CD74P04233 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.67□□□□□ -1.98
CD74P04233 AC090617.7-201ENST00000623952 126 ntBASIC2.67□□□□□ -1.98
CD74P04233 ZNF807-201ENST00000328088 1707 ntBASIC2.67□□□□□ -1.98
CD74P04233 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CD74P04233 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CD74P04233 AC090740.1-201ENST00000623193 2262 ntBASIC2.67□□□□□ -1.98
CD74P04233 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CD74P04233 ZNF285B-201ENST00000561698 1767 ntBASIC2.66□□□□□ -1.98
CD74P04233 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CD74P04233 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CD74P04233 RNU5B-1-201ENST00000363286 116 ntBASIC2.66□□□□□ -1.98
CD74P04233 OR1L1-202ENST00000373686 1083 ntBASIC2.66□□□□□ -1.98
CD74P04233 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms