Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 OR52A4P-203ENST00000498233 1014 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AC008638.1-201ENST00000506035 866 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AC104108.1-201ENST00000509930 412 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.42□□□□□ -2.02
SSNA1O43805 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC2.42□□□□□ -2.02
SSNA1O43805 AP000790.1-201ENST00000528891 737 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.42□□□□□ -2.02
SSNA1O43805 AC074051.3-201ENST00000570238 358 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AL137843.1-201ENST00000605078 385 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 BX322635.1-201ENST00000605804 496 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AC005046.1-201ENST00000608515 625 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AC005962.2-201ENST00000611427 652 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AC009464.1-201ENST00000615731 469 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AL355493.4-201ENST00000618530 292 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AL161637.1-201ENST00000622380 412 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 AC091953.5-201ENST00000622919 233 ntBASIC2.42□□□□□ -2.02
SSNA1O43805 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.42□□□□□ -2.02
SSNA1O43805 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SSNA1O43805 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SSNA1O43805 AC026241.1-201ENST00000517873 2142 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSNA1O43805 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSNA1O43805 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SSNA1O43805 AL139095.1-201ENST00000404326 391 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 RPL7P30-201ENST00000420888 709 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.41□□□□□ -2.02
SSNA1O43805 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.41□□□□□ -2.02
SSNA1O43805 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 AC012497.1-201ENST00000429392 575 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 ZNF965P-201ENST00000432501 817 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 TPTE2P1-204ENST00000435256 593 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 LSM1P1-201ENST00000438629 273 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 HMGN3P1-201ENST00000453847 193 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 BTF3P5-201ENST00000457252 467 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 RPS20P24-201ENST00000457473 361 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 AC006445.2-201ENST00000510061 472 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 AC104619.4-201ENST00000510773 249 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 RN7SKP272-201ENST00000516988 232 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.41□□□□□ -2.02
SSNA1O43805 HPRT1P3-201ENST00000539521 576 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 AL355836.1-201ENST00000555951 870 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 RN7SL703P-201ENST00000578485 302 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 MIR4284-201ENST00000578924 81 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 AC060766.3-201ENST00000591442 263 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.41□□□□□ -2.02
SSNA1O43805 AC005972.3-201ENST00000606304 481 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 AL355802.4-201ENST00000607635 548 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 MFSD8-245ENST00000641743 948 ntBASIC2.41□□□□□ -2.02
SSNA1O43805 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.41□□□□□ -2.02
SSNA1O43805 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.4□□□□□ -2.02
SSNA1O43805 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.4□□□□□ -2.03
SSNA1O43805 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SSNA1O43805 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSNA1O43805 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SSNA1O43805 RNU6-1005P-201ENST00000384519 107 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 RPL21P17-201ENST00000397467 475 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 AL353692.2-201ENST00000407054 335 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.4□□□□□ -2.03
SSNA1O43805 RN7SKP278-201ENST00000410504 342 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 HSFY4P-201ENST00000415994 1181 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 ARL2BPP3-201ENST00000421226 480 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 AL590762.3-201ENST00000436372 640 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.4□□□□□ -2.03
SSNA1O43805 RPL23AP23-201ENST00000452590 471 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 KC877373.1-201ENST00000479066 408 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 VPS26AP1-201ENST00000483197 979 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 HMGB1P41-201ENST00000520234 440 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 AC087272.1-201ENST00000523624 533 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 MTCO1P47-201ENST00000523889 1271 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 OR4P1P-201ENST00000530808 1136 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.4□□□□□ -2.03
SSNA1O43805 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 ATP5F1P7-201ENST00000567330 760 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 AC006130.2-201ENST00000586202 326 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.4□□□□□ -2.03
SSNA1O43805 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.4□□□□□ -2.03
SSNA1O43805 RPL23AP78-201ENST00000599928 470 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 AL162274.2-201ENST00000614406 332 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 SNHG22-203ENST00000617833 660 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.4□□□□□ -2.03
SSNA1O43805 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSNA1O43805 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms