Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 SNORA31.20-201ENST00000517111 133 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC104986.1-201ENST00000517978 436 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 EIF5A2P1-201ENST00000564027 460 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AL161756.2-201ENST00000604597 246 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HDGFL3Q9Y3E1 AC009487.2-201ENST00000420969 6821 ntBASIC2.59□□□□□ -2
HDGFL3Q9Y3E1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
HDGFL3Q9Y3E1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 RNU6-543P-201ENST00000362576 108 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 RNU6-40P-201ENST00000384254 107 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 RNU6-837P-201ENST00000391056 108 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AL591034.1-201ENST00000407447 340 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 RNA5SP56-201ENST00000410277 118 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 RNU4-65P-201ENST00000410473 140 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AL451074.5-201ENST00000415894 435 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 SAR1AP4-201ENST00000429225 591 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 RPL23AP83-201ENST00000434984 473 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC004865.1-201ENST00000442276 1003 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AL034418.1-201ENST00000448675 860 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC233982.1-201ENST00000451247 436 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 NIPA2P5-201ENST00000452282 464 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 GSTA11P-201ENST00000452866 669 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 RPL21P41-201ENST00000459863 264 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC011825.1-201ENST00000484967 388 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 RNF138P1-201ENST00000502765 546 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC111000.2-201ENST00000507775 550 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC133963.2-201ENST00000513686 578 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC239860.2-201ENST00000525886 270 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 TRAV11-201ENST00000539512 339 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 MTCO3P13-201ENST00000577757 781 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 VIS1.1-201ENST00000610517 203 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AL110115.1-201ENST00000614396 364 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 FAM35BP-202ENST00000497389 3337 ntBASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.58□□□□□ -2
HDGFL3Q9Y3E1 AC108206.1-201ENST00000570186 4159 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AC046144.1-201ENST00000478559 1853 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 RNU6-50P-201ENST00000362356 103 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 SNORA44-201ENST00000384584 132 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 RPS3AP26-201ENST00000398259 784 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AC109780.2-201ENST00000413467 845 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 CYCSP32-201ENST00000440548 321 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 HMGB1P25-201ENST00000468402 607 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 GMPSP1-201ENST00000514075 579 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 RNU6-711P-201ENST00000517255 106 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AC113192.3-201ENST00000529152 742 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 HPRT1P3-201ENST00000539521 576 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AC024153.1-201ENST00000603103 365 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AC107871.2-201ENST00000612894 502 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AC022509.4-201ENST00000621404 572 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 AP001002.2-201ENST00000625137 386 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 ZNF90P1-201ENST00000480493 1951 ntBASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
HDGFL3Q9Y3E1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 RNU6-374P-201ENST00000364146 108 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 UBA52P6-201ENST00000399822 382 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 RNU2-17P-201ENST00000410290 190 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 RPS3AP9-201ENST00000417027 792 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 YPEL5P1-201ENST00000419731 367 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AL139132.1-201ENST00000431587 344 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms