Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AP001330.4-201ENST00000604350 154 ntBASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 BNIP3P31-201ENST00000604515 566 ntBASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 AL591034.3-201ENST00000605511 685 ntBASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 AC112220.2-201ENST00000605513 533 ntBASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 CYCSP41-201ENST00000616920 296 ntBASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 AC104985.3-201ENST00000623479 597 ntBASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 ZNF807-201ENST00000328088 1707 ntBASIC2.87□□□□□ -1.95
KCNIP3Q9Y2W7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AL356274.2-201ENST00000624379 3752 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 SNRPEP3-201ENST00000338402 276 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 RNU6-1155P-201ENST00000363554 107 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 RNU4-51P-201ENST00000364206 140 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AL354719.1-201ENST00000406535 843 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 RN7SKP53-201ENST00000411337 315 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC245052.5-201ENST00000416320 649 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 UBE2D3P2-201ENST00000424409 445 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 RPL7P44-201ENST00000424827 742 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 OR8F1P-201ENST00000425243 930 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 MTCO1P39-201ENST00000426148 480 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC073143.1-201ENST00000436316 395 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 RPL23AP74-201ENST00000437246 471 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 USP9YP22-201ENST00000438971 294 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 RPL21P2-201ENST00000440049 481 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 HMGB3P11-201ENST00000440127 604 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 RFC5P1-201ENST00000454419 874 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC007967.1-201ENST00000455422 1159 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC026410.2-201ENST00000460281 156 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 RPS15AP17-201ENST00000470598 390 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC069528.1-202ENST00000482888 637 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 OR4G11P-201ENST00000492842 939 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC104986.1-201ENST00000517978 436 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 SETP7-201ENST00000552169 453 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 FAM60BP-201ENST00000578364 658 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC073387.2-201ENST00000604797 784 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 RNU1-30P-201ENST00000606575 163 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC009237.15-201ENST00000610252 501 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC023158.2-201ENST00000614876 543 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC073348.1-201ENST00000623002 331 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AL356585.4-201ENST00000623078 1229 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC010872.1-201ENST00000624225 675 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC120349.2-201ENST00000625002 298 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AL392088.2-201ENST00000637607 285 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC032011.1-201ENST00000611703 1549 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 AC107982.1-201ENST00000507171 1300 ntBASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.86□□□□□ -1.95
KCNIP3Q9Y2W7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 RNU5D-1-201ENST00000363299 116 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 RNU6-224P-201ENST00000384055 107 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 RNU6-1000P-201ENST00000391066 106 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 RPS15AP38-201ENST00000413110 372 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 AC109780.2-201ENST00000413467 845 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 RPL21P40-201ENST00000428586 483 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 GTF2IP3-201ENST00000433887 494 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 AL645638.1-201ENST00000440519 361 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 Z95327.1-201ENST00000446082 482 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 RPL39P6-201ENST00000448289 150 ntBASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.85□□□□□ -1.95
KCNIP3Q9Y2W7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms