Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 SALL4P2-201ENST00000423288 2910 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 OR52B1P-201ENST00000316506 909 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RNU6-97P-201ENST00000363387 104 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RNU6-169P-201ENST00000365336 107 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 Y_RNA.535-201ENST00000384612 99 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 MIR550A3-201ENST00000390735 95 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RPL7P60-201ENST00000397636 735 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RSU1P3-201ENST00000412878 835 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RPL36AP36-201ENST00000418616 301 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 OR2B7P-201ENST00000429302 934 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 EZH2P1-201ENST00000431167 291 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 GTF2IP20-201ENST00000431663 360 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC093156.1-201ENST00000440382 670 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC079781.2-201ENST00000446424 169 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RPL7P52-201ENST00000449200 742 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC021382.1-201ENST00000483523 359 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC231760.1-201ENST00000498002 260 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC139783.2-201ENST00000504847 1145 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 SNORA40.12-201ENST00000516329 111 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RNU6-835P-201ENST00000516974 104 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC022616.3-201ENST00000523940 148 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 HIF1AP1-201ENST00000553642 175 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AL138976.2-201ENST00000563989 694 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC015917.1-201ENST00000579654 510 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC007497.1-201ENST00000610421 561 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC009233.1-201ENST00000616477 371 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC007742.2-201ENST00000618226 398 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AC010338.1-201ENST00000621823 717 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 IRF5P1-201ENST00000504852 2164 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 AL672167.1-205ENST00000641112 3080 ntBASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PPARGC1AQ9UBK2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC009902.3-201ENST00000606235 2172 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 Z73965.1-201ENST00000623412 2297 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 Y_RNA.509-201ENST00000384506 99 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 RN7SKP235-201ENST00000410662 305 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC114755.2-201ENST00000413520 361 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 ELOCP4-201ENST00000420090 333 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC006548.1-201ENST00000427470 102 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 RPS27P18-201ENST00000431701 247 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 UBE2V1P13-201ENST00000436983 439 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AURKAPS2-201ENST00000454983 333 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 RPS20P20-201ENST00000460498 340 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 RN7SL346P-201ENST00000491561 294 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC092470.1-201ENST00000546187 132 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC123904.3-201ENST00000547218 814 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 AC007424.1-203ENST00000554613 687 ntBASIC5.02□□□□□ -1.61
PPARGC1AQ9UBK2 OR4T1P-201ENST00000554933 911 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms