Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL20A1Q9P218 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC010678.1-201ENST00000614118 713 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC039056.2-201ENST00000622261 511 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC008785.1-201ENST00000624475 456 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AP005264.7-201ENST00000625003 745 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 MARK2P15-201ENST00000432204 2186 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL20A1Q9P218 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC017104.4-201ENST00000636283 1592 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL20A1Q9P218 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL20A1Q9P218 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 Y_RNA.97-201ENST00000363094 102 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 RNU5E-5P-201ENST00000365379 116 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 MT-TC-201ENST00000387405 66 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 RN7SKP56-201ENST00000410513 331 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC007899.1-201ENST00000412776 775 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 Z97055.1-201ENST00000419730 712 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC109583.1-201ENST00000432156 268 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 AL450263.2-201ENST00000439400 589 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC092641.1-201ENST00000440229 772 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 Z95327.1-201ENST00000446082 482 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 RPL21P103-201ENST00000479921 488 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AP001025.2-201ENST00000490908 477 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC034222.1-201ENST00000494052 532 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC079140.3-201ENST00000511111 550 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 HIGD1AP3-201ENST00000515857 278 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 RNA5SP179-201ENST00000517284 121 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 MIR5685-201ENST00000579080 79 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 MIR4307-201ENST00000582802 84 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 MIR3158-1-201ENST00000583596 81 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AL353997.4-201ENST00000586196 166 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 AL451044.1-201ENST00000604867 238 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC091167.4-201ENST00000605079 184 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC245389.1-201ENST00000605141 529 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AL390208.1-201ENST00000605885 644 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC100793.4-201ENST00000613683 429 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AC027807.2-201ENST00000616099 408 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AL590240.3-201ENST00000621416 943 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 MIR7702-201ENST00000621931 59 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 AL354798.1-201ENST00000622505 329 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 FP236240.3-201ENST00000623061 327 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL20A1Q9P218 LINC01109-201ENST00000603837 3081 ntBASIC4.56□□□□□ -1.68
COL20A1Q9P218 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.56□□□□□ -1.68
COL20A1Q9P218 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC092104.1-201ENST00000497346 1441 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL20A1Q9P218 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL20A1Q9P218 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL20A1Q9P218 RNA5SP124-201ENST00000362739 110 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL20A1Q9P218 CDK8P2-201ENST00000415020 547 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 DLGAP5P1-201ENST00000430307 464 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 USP9YP29-201ENST00000445112 563 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 RPL29P29-201ENST00000448725 423 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 RPS20P24-201ENST00000457473 361 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 OR9M1P-201ENST00000459641 921 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC022447.1-201ENST00000515358 464 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 FABP5P5-201ENST00000515537 406 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC093853.1-201ENST00000515689 483 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms