Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AL450326.2-201ENST00000421913 1962 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 MFSD8-218ENST00000641186 4448 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AC007938.2-201ENST00000604666 2634 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 PPIAP22-201ENST00000358455 498 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 Y_RNA.4-201ENST00000362333 112 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 Y_RNA.190-201ENST00000363964 101 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 Y_RNA.344-201ENST00000365381 112 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 SNORA68-201ENST00000384437 133 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 MIR1265-201ENST00000408444 86 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 RN7SKP188-201ENST00000410789 317 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 RN7SKP101-201ENST00000411376 320 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 AC004941.2-201ENST00000427009 228 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 CYCSP51-201ENST00000443545 318 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 RN7SL518P-201ENST00000491887 280 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 RN7SL306P-201ENST00000492941 296 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 RNA5SP287-201ENST00000516358 103 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 RNU6-107P-201ENST00000516643 102 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 AP001803.1-201ENST00000525668 147 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 RN7SL667P-201ENST00000582817 298 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 AC092032.1-201ENST00000603090 165 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 AC097381.3-201ENST00000608962 462 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.86□□□□□ -1.15
RNF39Q9H2S5 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RNF39Q9H2S5 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 RNA5SP391-201ENST00000363456 119 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 RPS20P14-201ENST00000412545 360 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 RPS10P14-201ENST00000440748 502 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 LINC02210-201ENST00000444561 288 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 snoU109.2-201ENST00000459316 135 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 RN7SL180P-201ENST00000466769 294 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 AC083906.1-201ENST00000509298 406 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 AC011406.1-201ENST00000512440 370 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 RNA5SP518-201ENST00000515957 119 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 RNA5SP236-201ENST00000516169 116 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 UBE2Q2P8-201ENST00000560644 102 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 MIR4668-201ENST00000582284 70 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 MIR6070-201ENST00000613967 103 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 pRNA.12-201ENST00000614353 90 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 pRNA.3-201ENST00000615048 90 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 AL138880.2-201ENST00000616214 239 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 AC018992.1-201ENST00000523778 2149 ntBASIC7.85□□□□□ -1.15
RNF39Q9H2S5 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
RNF39Q9H2S5 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms