Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC011468.4-201ENST00000603942 409 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC080013.3-201ENST00000606839 578 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 MLECP1-201ENST00000615893 709 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC120349.3-201ENST00000624377 529 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC011978.2-201ENST00000569835 2054 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL157700.1-201ENST00000561973 1432 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AP000776.1-201ENST00000530032 1663 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC005539.1-201ENST00000443768 1479 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RNU5D-1-201ENST00000363299 116 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RNU6-157P-201ENST00000383957 107 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RNU6-1293P-201ENST00000384077 107 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 MIR506-201ENST00000384998 124 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RPL23AP47-201ENST00000408017 460 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RNA5SP344-201ENST00000411081 104 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RPS3AP9-201ENST00000417027 792 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC092634.6-201ENST00000418558 192 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC006960.1-201ENST00000419980 153 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL139421.1-201ENST00000423010 169 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC093151.1-201ENST00000427711 313 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 BRWD1P3-201ENST00000428816 390 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RPS27AP12-201ENST00000429552 465 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL117339.2-201ENST00000430475 180 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL050321.1-201ENST00000432363 400 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 ATP5F1P1-201ENST00000433775 569 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL008629.1-201ENST00000438615 184 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RPS20P21-201ENST00000466859 343 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL139099.1-201ENST00000497398 403 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RNU6-1261P-201ENST00000517194 104 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 PTP4A1P6-201ENST00000531034 478 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 ZNF321P-202ENST00000550843 495 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 DUXAP1-201ENST00000556632 463 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 MTND3P12-201ENST00000559068 328 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC008751.2-201ENST00000597885 980 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 RNU6-156P-201ENST00000621869 107 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 MIR6730-201ENST00000622213 67 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AL354798.1-201ENST00000622505 329 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 MTND2P41-201ENST00000637599 773 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 MTND5P19-201ENST00000424872 1794 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC107982.1-201ENST00000507171 1300 ntBASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC28BQ9BUN5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC032011.1-201ENST00000611703 1549 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 FRG1CP-201ENST00000358464 769 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 RNU2-42P-201ENST00000410697 113 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC007899.1-201ENST00000412776 775 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AL136133.1-201ENST00000413694 376 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AL356968.1-201ENST00000416622 474 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 MTCO3P1-205ENST00000422088 832 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 OR4F13P-201ENST00000428478 931 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC005345.1-201ENST00000431868 217 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 YWHAZP8-201ENST00000436935 731 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms