Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP88Q99567 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.85□□□□□ -1.63
NUP88Q99567 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP88Q99567 RN7SL703P-201ENST00000578485 302 ntBASIC4.85□□□□□ -1.63
NUP88Q99567 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP88Q99567 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP88Q99567 AC091965.4-201ENST00000607691 587 ntBASIC4.85□□□□□ -1.63
NUP88Q99567 AC122108.2-201ENST00000611946 526 ntBASIC4.85□□□□□ -1.63
NUP88Q99567 MIR7151-201ENST00000617477 60 ntBASIC4.85□□□□□ -1.63
NUP88Q99567 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.85□□□□□ -1.63
NUP88Q99567 AC019278.1-201ENST00000623516 479 ntBASIC4.85□□□□□ -1.63
NUP88Q99567 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP88Q99567 CRYM-AS1-204ENST00000637983 556 ntBASIC4.85□□□□□ -1.63
NUP88Q99567 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP88Q99567 NMD3P1-201ENST00000439704 1488 ntBASIC4.85□□□□□ -1.63
NUP88Q99567 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NUP88Q99567 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP88Q99567 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUP88Q99567 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
NUP88Q99567 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NUP88Q99567 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP88Q99567 MTCO1P24-201ENST00000515438 1558 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUP88Q99567 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUP88Q99567 RNA5SP52-201ENST00000362448 134 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP88Q99567 SNORD116-4-201ENST00000384733 96 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 RPS23P10-201ENST00000416185 486 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 AL161631.1-201ENST00000417933 486 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP88Q99567 RPL36AP36-201ENST00000418616 301 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 MTCYBP24-201ENST00000420387 1106 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUP88Q99567 RPS29P7-201ENST00000439662 171 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP88Q99567 AC092473.1-201ENST00000441098 221 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 USP9YP29-201ENST00000445112 563 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 GDI2P2-201ENST00000445131 608 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP88Q99567 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 PPIAP3-201ENST00000450588 505 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP88Q99567 BTF3P5-201ENST00000457252 467 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP88Q99567 OR4R3P-201ENST00000525084 838 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.84□□□□□ -1.63
NUP88Q99567 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.84□□□□□ -1.63
NUP88Q99567 AC074050.1-201ENST00000563247 211 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 AC107954.1-201ENST00000565906 727 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 CYP4A43P-201ENST00000568156 121 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP88Q99567 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP88Q99567 AL451044.1-201ENST00000604867 238 ntBASIC4.84□□□□□ -1.63
NUP88Q99567 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUP88Q99567 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP88Q99567 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUP88Q99567 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NUP88Q99567 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
NUP88Q99567 Z73965.1-201ENST00000623412 2297 ntBASIC4.84□□□□□ -1.64
NUP88Q99567 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NUP88Q99567 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP88Q99567 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP88Q99567 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUP88Q99567 AC092104.1-201ENST00000497346 1441 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NUP88Q99567 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUP88Q99567 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP88Q99567 RNU4-75P-201ENST00000364621 146 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 RNA5SP513-201ENST00000364648 118 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 Y_RNA.359-201ENST00000365498 102 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP88Q99567 RNU6-533P-201ENST00000384144 107 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 RNU6-769P-201ENST00000384407 104 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 MIR124-3-201ENST00000384866 87 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 AL138880.1-201ENST00000405824 642 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 RNU4-6P-201ENST00000410804 122 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 AL663109.1-201ENST00000411498 844 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP88Q99567 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP88Q99567 MTND1P28-201ENST00000435623 950 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 RSU1P2-202ENST00000437884 485 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 RPL23AP46-201ENST00000438548 490 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 RPL22P17-201ENST00000438729 315 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 AC006011.1-201ENST00000442758 349 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP88Q99567 USP9YP12-201ENST00000450481 570 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 MTND1P27-201ENST00000451117 902 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUP88Q99567 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP88Q99567 SSXP1-201ENST00000453640 473 ntBASIC4.83□□□□□ -1.64
NUP88Q99567 RPS20P32-201ENST00000456044 356 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms