Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL024509.2-201ENST00000493462 493 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 RNF138P1-201ENST00000502765 546 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 SLC25A15P5-201ENST00000508033 253 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.88□□□□□ -1.95
VAT1Q99536 MTCO2P32-201ENST00000514865 403 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.88□□□□□ -1.95
VAT1Q99536 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.88□□□□□ -1.95
VAT1Q99536 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.88□□□□□ -1.95
VAT1Q99536 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.88□□□□□ -1.95
VAT1Q99536 CKS1BP1-201ENST00000555221 240 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.88□□□□□ -1.95
VAT1Q99536 BNIP3P33-201ENST00000598912 569 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 AC135178.6-201ENST00000605314 398 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 AC093732.2-201ENST00000607950 274 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAT1Q99536 AP003400.6-201ENST00000624698 740 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.88□□□□□ -1.95
VAT1Q99536 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
VAT1Q99536 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.88□□□□□ -1.95
VAT1Q99536 MTCO1P18-201ENST00000455518 1419 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 OR5H2-201ENST00000355273 945 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VAT1Q99536 RNU6-1339P-201ENST00000363574 91 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.87□□□□□ -1.95
VAT1Q99536 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VAT1Q99536 RNU6-1181P-201ENST00000384191 106 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 RNU6-1005P-201ENST00000384519 107 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 MIR181A2-201ENST00000384863 110 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 SAR1AP2-201ENST00000392696 594 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 SFR1P1-201ENST00000403720 688 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.87□□□□□ -1.95
VAT1Q99536 DUTP6-201ENST00000425573 462 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.87□□□□□ -1.95
VAT1Q99536 AL390023.1-201ENST00000428836 262 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.87□□□□□ -1.95
VAT1Q99536 AC112653.1-201ENST00000443851 386 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 S100A11P2-201ENST00000467589 312 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.87□□□□□ -1.95
VAT1Q99536 MTCO3P35-201ENST00000485582 781 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 AC111000.2-201ENST00000507775 550 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.87□□□□□ -1.95
VAT1Q99536 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.87□□□□□ -1.95
VAT1Q99536 AC133963.2-201ENST00000513686 578 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.87□□□□□ -1.95
VAT1Q99536 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.87□□□□□ -1.95
VAT1Q99536 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.87□□□□□ -1.95
VAT1Q99536 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.87□□□□□ -1.95
VAT1Q99536 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.87□□□□□ -1.95
VAT1Q99536 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.87□□□□□ -1.95
VAT1Q99536 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.87□□□□□ -1.95
VAT1Q99536 AL133393.1-201ENST00000603277 287 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.87□□□□□ -1.95
VAT1Q99536 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.87□□□□□ -1.95
VAT1Q99536 FRG1HP-204ENST00000617940 757 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 AL162233.1-201ENST00000620014 944 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 AL590396.2-201ENST00000636511 1041 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.87□□□□□ -1.95
VAT1Q99536 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VAT1Q99536 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VAT1Q99536 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
VAT1Q99536 SEC63P2-201ENST00000503863 1939 ntBASIC2.87□□□□□ -1.95
VAT1Q99536 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VAT1Q99536 RNA5SP27-201ENST00000363839 119 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 RNU6-1226P-201ENST00000384317 107 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 MT-TC-201ENST00000387405 66 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 RNA5SP129-201ENST00000410276 118 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 RNA5SP56-201ENST00000410277 118 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 RNU4-78P-201ENST00000410940 126 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 EEF1A1P41-201ENST00000414667 207 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.86□□□□□ -1.95
VAT1Q99536 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.86□□□□□ -1.95
VAT1Q99536 AC073310.1-201ENST00000423226 1033 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.86□□□□□ -1.95
VAT1Q99536 AC093151.1-201ENST00000427711 313 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 AL139132.1-201ENST00000431587 344 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.86□□□□□ -1.95
VAT1Q99536 RSL24D1P2-201ENST00000445584 366 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 MTND3P4-201ENST00000453537 303 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 HMGB1P15-201ENST00000453854 435 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 AC010285.1-201ENST00000470580 392 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 RPS27P23-201ENST00000487608 251 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 AC010374.2-201ENST00000512933 535 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 RNU6-488P-201ENST00000515918 99 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 RNU6-751P-201ENST00000516382 101 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 AC103833.1-201ENST00000517442 172 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.86□□□□□ -1.95
VAT1Q99536 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.86□□□□□ -1.95
VAT1Q99536 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.86□□□□□ -1.95
VAT1Q99536 AC092470.1-201ENST00000546187 132 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.86□□□□□ -1.95
VAT1Q99536 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VAT1Q99536 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VAT1Q99536 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VAT1Q99536 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VAT1Q99536 AC073055.1-201ENST00000456901 1621 ntBASIC2.86□□□□□ -1.95
VAT1Q99536 AC103988.1-201ENST00000566382 2177 ntBASIC2.85□□□□□ -1.95
VAT1Q99536 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms