Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC016877.3-201ENST00000606778 504 ntBASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 AC080013.4-201ENST00000607624 649 ntBASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 AL732618.1-201ENST00000623251 301 ntBASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 AC095031.1-201ENST00000623685 672 ntBASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 AC120349.3-201ENST00000624377 529 ntBASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 AP000553.6-201ENST00000641242 118 ntBASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 SGO1P2-201ENST00000429458 1589 ntBASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM5Q96HC4 AP001486.2-201ENST00000561652 5113 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 RNU6-216P-201ENST00000363282 104 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 RNU6-283P-201ENST00000364788 107 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 RNU6-636P-201ENST00000384598 107 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 RNU2-42P-201ENST00000410697 113 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AL139247.1-201ENST00000422768 325 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 GTF2IP23-201ENST00000423746 351 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 PSMA6P3-201ENST00000428242 164 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 EEF1A1P39-201ENST00000440791 250 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 Z95327.1-201ENST00000446082 482 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 USP9YP34-201ENST00000453983 808 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC093278.1-201ENST00000494700 600 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC096751.1-202ENST00000502691 1067 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC113347.3-201ENST00000509113 148 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 MTCYBP16-201ENST00000509187 1129 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC119751.5-201ENST00000514077 770 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 SNORA31.8-201ENST00000516327 108 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AL391156.1-201ENST00000554965 554 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC061975.8-201ENST00000587058 721 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 MIR8058-201ENST00000615737 89 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC048344.4-201ENST00000619744 527 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC013470.4-201ENST00000619978 986 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 AC068057.2-201ENST00000624047 895 ntBASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM5Q96HC4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 RNA5SP42-201ENST00000364278 115 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 SNORA40.2-201ENST00000390847 128 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AL137014.1-201ENST00000420490 1226 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 RPL39P6-201ENST00000448289 150 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC093853.1-201ENST00000515689 483 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC008011.1-201ENST00000545989 227 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC091057.2-201ENST00000602594 792 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC012669.1-201ENST00000603209 283 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AP001330.4-201ENST00000604350 154 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AL391497.1-201ENST00000608671 547 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AL390240.1-201ENST00000612950 384 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC015967.1-201ENST00000619893 476 ntBASIC3.6□□□□□ -1.83
PDLIM5Q96HC4 AC022079.1-201ENST00000621546 602 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms