Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC025465.3-201ENST00000510570 311 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 RNU6-475P-201ENST00000516073 104 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC022868.1-201ENST00000517767 391 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 OR4P1P-201ENST00000530808 1136 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 AP003385.6-201ENST00000531603 374 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 MIR3146-201ENST00000580367 79 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC125232.2-201ENST00000592457 143 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC012616.1-201ENST00000600294 197 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 AL354984.3-201ENST00000604803 325 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 MIR6128-201ENST00000615528 109 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 PISRT1.1-201ENST00000616930 107 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 uc_338.34-201ENST00000617467 174 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 AL512643.1-201ENST00000635735 524 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC004817.4-201ENST00000602396 3625 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 DDX18P4-201ENST00000511690 1966 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 AC233263.6-201ENST00000631132 1963 ntBASIC5.8□□□□□ -1.48
TRIM11Q96F44 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM11Q96F44 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM11Q96F44 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM11Q96F44 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM11Q96F44 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM11Q96F44 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM11Q96F44 RNU6-774P-201ENST00000363238 107 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM11Q96F44 Y_RNA.428-201ENST00000384078 102 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 MIR320B1-201ENST00000390209 79 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 RNA5SP241-201ENST00000391326 114 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 RNU4-25P-201ENST00000410569 230 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC048351.1-201ENST00000420064 602 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AL133173.1-201ENST00000423458 397 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AL606753.1-201ENST00000427435 87 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 RPL7AP49-201ENST00000429522 581 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 AL591438.1-201ENST00000433508 581 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 AL589765.3-201ENST00000446084 462 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC105399.1-202ENST00000447303 205 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 PABPC1P3-201ENST00000469174 459 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC026784.1-201ENST00000507986 352 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC109481.1-201ENST00000509173 282 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 MTND1P19-201ENST00000511780 315 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 HMGN1P9-201ENST00000515212 298 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 RNU6-1016P-201ENST00000516689 94 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 SCARNA20.4-201ENST00000516969 131 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 SNORD116.3-201ENST00000517176 78 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC131281.1-201ENST00000522984 164 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AF279873.1-201ENST00000523393 313 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 MTND4P7-201ENST00000523876 130 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AP003497.1-201ENST00000528472 562 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 RPL21P12-201ENST00000559810 515 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 AC010378.1-201ENST00000619270 362 ntBASIC5.79□□□□□ -1.48
TRIM11Q96F44 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM11Q96F44 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM11Q96F44 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM11Q96F44 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM11Q96F44 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM11Q96F44 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TRIM11Q96F44 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM11Q96F44 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM11Q96F44 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM11Q96F44 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM11Q96F44 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM11Q96F44 HSPE1P11-201ENST00000339579 310 ntBASIC5.78□□□□□ -1.48
TRIM11Q96F44 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms