Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-192P-201ENST00000391253 100 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AL121978.1-201ENST00000402778 359 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 RN7SKP284-201ENST00000411002 343 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AL008987.1-201ENST00000415528 237 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC008173.1-201ENST00000418901 264 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 RWDD4P2-201ENST00000426392 563 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 RPL34P26-201ENST00000445636 354 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC008280.2-201ENST00000455473 307 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 RPL31P3-201ENST00000458430 332 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC023050.1-201ENST00000498198 304 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 RPF2P2-201ENST00000504693 896 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 PCBP2P3-201ENST00000509726 843 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 OR5BM1P-201ENST00000512021 366 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AP000916.1-201ENST00000533869 835 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 MIR548Y-201ENST00000582739 110 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC090525.3-201ENST00000605601 189 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AC055764.2-201ENST00000610089 670 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 AL603755.1-201ENST00000619504 163 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 CEP170P1-201ENST00000502249 4587 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AL139811.1-201ENST00000424779 2299 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 RNU6-796P-201ENST00000391086 107 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 RN7SKP56-201ENST00000410513 331 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 Y_RNA.619-201ENST00000410951 90 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 RPS3AP37-201ENST00000419176 745 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 GTF2IP3-201ENST00000433887 494 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AL008629.1-201ENST00000438615 184 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 MTND2P4-201ENST00000445034 1004 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AL589880.1-201ENST00000448271 287 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 S100A11P1-201ENST00000477525 312 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 RPS4XP6-201ENST00000477670 797 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 MTND2P14-201ENST00000482139 351 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC079203.1-201ENST00000487972 404 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 SUMO1P1-201ENST00000497904 306 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC091951.3-201ENST00000504093 246 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 MTCYBP16-201ENST00000509187 1129 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC011352.1-201ENST00000512300 793 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AP002404.1-201ENST00000532005 451 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC024909.2-201ENST00000553035 286 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC090888.1-201ENST00000561335 1141 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC080078.2-201ENST00000603766 501 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC105129.3-201ENST00000605455 485 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 OR2AS2P-201ENST00000606902 342 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC007349.4-201ENST00000608114 532 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 OR6R2P-201ENST00000609216 300 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 AL137790.1-201ENST00000634283 177 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC007671.2-201ENST00000637344 619 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 AC233263.6-201ENST00000631132 1963 ntBASIC3.93□□□□□ -1.78
SNED1Q8TER0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNED1Q8TER0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 MIR449A-201ENST00000362113 91 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 RNA5SP432-201ENST00000362480 116 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AL136310.1-201ENST00000404926 654 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 ATF1P1-201ENST00000406040 927 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 HMGB3P18-201ENST00000406327 590 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms