Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.77□□□□□ -1.49
USP48Q86UV5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.77□□□□□ -1.49
USP48Q86UV5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
USP48Q86UV5 MTND5P33-201ENST00000571250 1450 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AC093591.2-201ENST00000565254 3843 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
USP48Q86UV5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP48Q86UV5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP48Q86UV5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.76□□□□□ -1.49
USP48Q86UV5 RNU6-181P-201ENST00000363225 107 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 RNA5SP28-201ENST00000363841 119 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 AL359837.1-201ENST00000381357 287 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 RPL32P23-201ENST00000397237 405 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 RNU2-15P-201ENST00000410692 191 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.76□□□□□ -1.49
USP48Q86UV5 EIF4HP2-201ENST00000424380 563 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 TDGF1P1-201ENST00000445734 527 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 BX276092.4-201ENST00000452056 248 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.76□□□□□ -1.49
USP48Q86UV5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.76□□□□□ -1.49
USP48Q86UV5 CYCSP34-201ENST00000458172 304 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.76□□□□□ -1.49
USP48Q86UV5 AC087385.1-201ENST00000475062 312 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 AC023194.1-201ENST00000493084 308 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 AC069439.1-201ENST00000494739 167 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 HMGB1P21-201ENST00000502313 581 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.76□□□□□ -1.49
USP48Q86UV5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.76□□□□□ -1.49
USP48Q86UV5 AC007016.1-201ENST00000512110 244 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 RNU6-445P-201ENST00000516949 107 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 AP000907.2-201ENST00000530827 353 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.76□□□□□ -1.49
USP48Q86UV5 SETP2-201ENST00000553886 926 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.76□□□□□ -1.49
USP48Q86UV5 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.76□□□□□ -1.49
USP48Q86UV5 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.76□□□□□ -1.49
USP48Q86UV5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.76□□□□□ -1.49
USP48Q86UV5 AP003117.2-201ENST00000606010 545 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 AL158211.4-201ENST00000606988 584 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 AL022401.1-201ENST00000619498 108 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.76□□□□□ -1.49
USP48Q86UV5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
USP48Q86UV5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP48Q86UV5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.76□□□□□ -1.49
USP48Q86UV5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP48Q86UV5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP48Q86UV5 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
USP48Q86UV5 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.75□□□□□ -1.49
USP48Q86UV5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.75□□□□□ -1.49
USP48Q86UV5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.75□□□□□ -1.49
USP48Q86UV5 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
USP48Q86UV5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
USP48Q86UV5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.75□□□□□ -1.49
USP48Q86UV5 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
USP48Q86UV5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
USP48Q86UV5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
USP48Q86UV5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
USP48Q86UV5 RNU5E-1-201ENST00000362477 120 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 RNU6-1090P-201ENST00000364065 94 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 RNU6-359P-201ENST00000365466 108 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 Y_RNA.409-201ENST00000383990 98 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 U3.20-201ENST00000390909 217 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 RN7SKP235-201ENST00000410662 305 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 RNU2-41P-201ENST00000410991 178 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 USP9YP27-201ENST00000418455 438 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.75□□□□□ -1.49
USP48Q86UV5 AC008065.1-201ENST00000428525 348 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.75□□□□□ -1.49
USP48Q86UV5 AC114495.1-201ENST00000441274 436 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 USP9YP15-201ENST00000442391 422 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 MTND3P10-201ENST00000450967 341 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AL445433.1-201ENST00000457507 257 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.75□□□□□ -1.49
USP48Q86UV5 SNORA84-201ENST00000459229 133 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AC020890.1-201ENST00000491837 504 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AC091167.1-201ENST00000492017 396 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.75□□□□□ -1.49
USP48Q86UV5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.75□□□□□ -1.49
USP48Q86UV5 Y_RNA.693-201ENST00000516641 110 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 RN7SKP277-201ENST00000516895 283 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AL512360.1-201ENST00000555346 234 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 ANP32BP3-201ENST00000559213 706 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 MIR3118-1-201ENST00000581787 76 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 YWHAQP7-201ENST00000603536 658 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AL391646.1-201ENST00000603860 190 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AC009994.1-201ENST00000606889 253 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AC010424.2-201ENST00000607594 443 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.75□□□□□ -1.49
USP48Q86UV5 AL355472.4-201ENST00000610233 626 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AP006248.2-201ENST00000623309 592 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AC091953.2-201ENST00000623979 160 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 AC079597.1-201ENST00000624306 508 ntBASIC5.75□□□□□ -1.49
USP48Q86UV5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.75□□□□□ -1.49
USP48Q86UV5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.75□□□□□ -1.49
USP48Q86UV5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
USP48Q86UV5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
USP48Q86UV5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
USP48Q86UV5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
USP48Q86UV5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
USP48Q86UV5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms