Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 AC011445.2-201ENST00000599274 173 ntBASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 HMGN2P28-201ENST00000606102 262 ntBASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 AC127459.3-201ENST00000624328 466 ntBASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LYSMD3Q7Z3D4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC138907.8-201ENST00000623981 2256 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 Y_RNA.274-201ENST00000364714 101 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 SNORA23-201ENST00000365128 182 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 Y_RNA.464-201ENST00000384282 110 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC005522.1-201ENST00000395416 346 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 RNU2-71P-201ENST00000411395 189 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC108032.1-201ENST00000416706 207 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AL035660.1-201ENST00000422041 222 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AL158071.1-201ENST00000430315 461 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC126120.1-201ENST00000431082 470 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 RHOT1P3-201ENST00000436571 331 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC087884.1-201ENST00000469738 328 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 RNU6-255P-201ENST00000516957 105 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 IGLV3-30-201ENST00000524362 298 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC091078.2-201ENST00000557145 559 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC090517.1-201ENST00000569307 266 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AC092121.1-201ENST00000569452 202 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 MIR548AI-201ENST00000579940 88 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AL049555.1-201ENST00000562834 1933 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AL445437.1-201ENST00000623157 3087 ntBASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD3Q7Z3D4 AL591135.1-201ENST00000401578 5914 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AL359854.1-201ENST00000614203 1594 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 MIR133A2-201ENST00000347538 102 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 RNU4-42P-201ENST00000364738 142 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 Y_RNA.297-201ENST00000364950 91 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 RNA5SP240-201ENST00000365355 128 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 RN7SKP81-201ENST00000365603 331 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 RNU6-393P-201ENST00000384475 107 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 SNORA17A-201ENST00000391185 133 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 PCNPP3-201ENST00000393579 471 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 MIR548H3-201ENST00000408771 118 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 RNU6-293P-201ENST00000411259 106 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 PRUNEP1-201ENST00000425846 705 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 FCF1P4-201ENST00000448326 183 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AL139109.1-201ENST00000455491 297 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AC004129.2-201ENST00000457229 287 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 SNORD97-201ENST00000459187 142 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 PPIAP19-201ENST00000486414 492 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 RNU6-397P-201ENST00000516226 104 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 RNU5B-3P-201ENST00000516601 115 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AL133271.1-201ENST00000538229 291 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AC005341.1-201ENST00000571086 708 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 FAM27E4-201ENST00000605259 342 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 RPL12P48-201ENST00000605620 304 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 AL590099.1-201ENST00000615276 138 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 SNORA17.5-201ENST00000630429 132 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms