Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNU6-201P-201ENST00000517100 61 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RNU6-709P-201ENST00000517257 104 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AP001922.4-201ENST00000526967 290 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RFPL1S-203ENST00000539579 330 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AC123904.2-201ENST00000548059 300 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RPL7P50-201ENST00000600588 727 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AC095050.2-201ENST00000510748 1458 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 DEFB109C-201ENST00000382575 264 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 DEFB109B-201ENST00000382656 264 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 OR5H15-201ENST00000383696 930 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 RNU6-637P-201ENST00000384050 107 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 RN7SKP56-201ENST00000410513 331 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 RPL7AP73-201ENST00000413490 353 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AL353777.1-201ENST00000425552 326 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 RPEP2-201ENST00000432149 701 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AL451139.1-201ENST00000434718 346 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC024082.2-201ENST00000434771 238 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 OR7E125P-201ENST00000443450 846 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC098824.1-201ENST00000453565 980 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 RPL35AP28-201ENST00000459730 331 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC055855.1-201ENST00000489563 579 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC025445.1-201ENST00000502728 300 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 HMGB3P15-201ENST00000507326 574 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC105914.1-201ENST00000511798 226 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 RNA5SP43-201ENST00000516559 110 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC100770.1-201ENST00000532310 322 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC069240.1-201ENST00000548774 375 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 EDDM3DP-201ENST00000554692 434 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC015912.2-201ENST00000571053 181 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC012213.3-201ENST00000577199 777 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AP001029.3-201ENST00000588063 596 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC008759.1-201ENST00000589783 983 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC024940.4-201ENST00000605507 246 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC133644.2-201ENST00000608142 540 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AL627230.1-201ENST00000613077 211 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC100827.5-201ENST00000615883 426 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AL591926.8-201ENST00000616876 211 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC009159.1-201ENST00000618386 642 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC243312.2-201ENST00000623340 601 ntBASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PPP4R4Q6NUP7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 RNU6-50P-201ENST00000362356 103 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 MIR3074-201ENST00000384885 81 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 MIR550A3-201ENST00000390735 95 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 SNORA40.3-201ENST00000390964 122 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 RNU6-754P-201ENST00000391166 107 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 MIR937-201ENST00000401271 86 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 COX6B1P1-201ENST00000415962 213 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 USP9YP14-201ENST00000430663 563 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 FTH1P1-201ENST00000437933 532 ntBASIC4.48□□□□□ -1.69
PPP4R4Q6NUP7 AL662791.1-201ENST00000441992 928 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms