Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC068135.1-201ENST00000446164 246 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCH1Q13635 RN7SL75P-201ENST00000461926 281 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AP000873.1-201ENST00000463987 400 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCH1Q13635 RN7SKP244-201ENST00000516513 307 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCH1Q13635 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCH1Q13635 AC139103.1-201ENST00000534696 1030 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.87□□□□□ -1.79
PTCH1Q13635 AC009101.1-201ENST00000568135 242 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AP001033.2-201ENST00000609701 1003 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC009159.1-201ENST00000618386 642 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC022079.2-201ENST00000619739 566 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCH1Q13635 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCH1Q13635 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PTCH1Q13635 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PTCH1Q13635 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTCH1Q13635 AL512646.1-201ENST00000269395 1077 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTCH1Q13635 SNORA51.12-201ENST00000384448 134 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 PRRC2CP1-201ENST00000404428 159 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC092745.2-202ENST00000411880 369 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCH1Q13635 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCH1Q13635 TPRKBP1-201ENST00000456243 481 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 snoU13.7-201ENST00000459220 104 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC087385.1-201ENST00000475062 312 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC090525.1-201ENST00000479116 478 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC126121.1-201ENST00000482313 553 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCH1Q13635 AC092045.1-201ENST00000495716 1231 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 RPS29P21-201ENST00000496272 170 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCH1Q13635 AC008565.1-201ENST00000509046 885 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCH1Q13635 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCH1Q13635 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCH1Q13635 MTND2P26-201ENST00000528255 1029 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCH1Q13635 DEFB122-202ENST00000569013 197 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC040174.2-201ENST00000602701 465 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCH1Q13635 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PTCH1Q13635 AC093831.2-201ENST00000624393 3427 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 MTCO1P18-201ENST00000455518 1419 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 MTND5P11-201ENST00000511037 1812 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PTCH1Q13635 MIR764-201ENST00000390811 85 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTCH1Q13635 RNU2-21P-201ENST00000410368 188 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 AL513043.1-201ENST00000439124 535 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.86□□□□□ -1.79
PTCH1Q13635 IFNA11P-201ENST00000446352 526 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 AC104058.1-201ENST00000448028 297 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.86□□□□□ -1.79
PTCH1Q13635 RNU4-60P-201ENST00000517239 135 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.86□□□□□ -1.79
PTCH1Q13635 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PTCH1Q13635 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.86□□□□□ -1.79
PTCH1Q13635 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.86□□□□□ -1.79
PTCH1Q13635 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.86□□□□□ -1.79
PTCH1Q13635 OR4H6P-202ENST00000603819 340 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 FRG1DP-201ENST00000635586 771 ntBASIC3.86□□□□□ -1.79
PTCH1Q13635 MAPK10-362ENST00000641864 4484 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PTCH1Q13635 MTND5P3-201ENST00000438536 1800 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PTCH1Q13635 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTCH1Q13635 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCH1Q13635 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTCH1Q13635 MIR148B-201ENST00000362252 99 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCH1Q13635 RNU6-1293P-201ENST00000384077 107 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 RPL21P3-201ENST00000395517 478 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 AL356057.3-201ENST00000402607 340 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 BTBD10P2-201ENST00000404779 676 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCH1Q13635 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.85□□□□□ -1.79
PTCH1Q13635 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCH1Q13635 RPL7P53-201ENST00000421245 739 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 BX276092.3-201ENST00000424182 230 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 RPL23AP33-201ENST00000442301 452 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 MTND2P3-201ENST00000452458 470 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 AC146507.2-201ENST00000460608 476 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCH1Q13635 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTCH1Q13635 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTCH1Q13635 AC021146.5-201ENST00000503544 545 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.85□□□□□ -1.79
PTCH1Q13635 SNORA31.21-201ENST00000517180 77 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCH1Q13635 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.85□□□□□ -1.79
PTCH1Q13635 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCH1Q13635 CBX3P5-201ENST00000552017 521 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCH1Q13635 AL450270.1-201ENST00000606160 391 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 AC107308.1-201ENST00000615897 301 ntBASIC3.85□□□□□ -1.79
PTCH1Q13635 RNU6-156P-201ENST00000621869 107 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms