Protein–RNA interactions for Protein: P78317

RNF4, E3 ubiquitin-protein ligase RNF4, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4P78317 RNU5E-6P-201ENST00000365574 115 ntBASIC5.02□□□□□ -1.61
RNF4P78317 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF4P78317 RNU6-432P-201ENST00000384196 109 ntBASIC5.02□□□□□ -1.61
RNF4P78317 SNORD51-201ENST00000384320 80 ntBASIC5.02□□□□□ -1.61
RNF4P78317 MTCYBP4-201ENST00000401524 249 ntBASIC5.02□□□□□ -1.61
RNF4P78317 RNU2-47P-201ENST00000410649 186 ntBASIC5.02□□□□□ -1.61
RNF4P78317 RNU6-370P-201ENST00000411008 104 ntBASIC5.02□□□□□ -1.61
RNF4P78317 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.02□□□□□ -1.61
RNF4P78317 VN1R36P-201ENST00000414936 291 ntBASIC5.02□□□□□ -1.61
RNF4P78317 ARL5AP1-201ENST00000418991 388 ntBASIC5.02□□□□□ -1.61
RNF4P78317 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF4P78317 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF4P78317 AC005094.1-201ENST00000440420 368 ntBASIC5.02□□□□□ -1.61
RNF4P78317 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.02□□□□□ -1.61
RNF4P78317 IGHV5-78-201ENST00000450948 295 ntBASIC5.02□□□□□ -1.61
RNF4P78317 AC107399.1-201ENST00000451226 265 ntBASIC5.02□□□□□ -1.61
RNF4P78317 PPIAP21-201ENST00000464473 501 ntBASIC5.02□□□□□ -1.61
RNF4P78317 AC092754.1-201ENST00000472975 479 ntBASIC5.02□□□□□ -1.61
RNF4P78317 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF4P78317 AL163540.1-201ENST00000485382 386 ntBASIC5.02□□□□□ -1.61
RNF4P78317 Y_RNA.654-201ENST00000497848 106 ntBASIC5.02□□□□□ -1.61
RNF4P78317 AC135721.1-201ENST00000497954 479 ntBASIC5.02□□□□□ -1.61
RNF4P78317 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF4P78317 SCARNA21.2-201ENST00000516600 166 ntBASIC5.02□□□□□ -1.61
RNF4P78317 DEFB109D-201ENST00000529497 240 ntBASIC5.02□□□□□ -1.61
RNF4P78317 APOOP3-201ENST00000536787 586 ntBASIC5.02□□□□□ -1.61
RNF4P78317 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF4P78317 AL163153.1-201ENST00000554223 283 ntBASIC5.02□□□□□ -1.61
RNF4P78317 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF4P78317 MIR4293-201ENST00000584305 78 ntBASIC5.02□□□□□ -1.61
RNF4P78317 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF4P78317 Z98200.1-201ENST00000607298 470 ntBASIC5.02□□□□□ -1.61
RNF4P78317 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF4P78317 AL512624.1-201ENST00000613638 469 ntBASIC5.02□□□□□ -1.61
RNF4P78317 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF4P78317 uc_338.7-201ENST00000621834 124 ntBASIC5.02□□□□□ -1.61
RNF4P78317 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF4P78317 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RNF4P78317 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RNF4P78317 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF4P78317 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF4P78317 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF4P78317 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF4P78317 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF4P78317 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF4P78317 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF4P78317 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF4P78317 AL138820.1-201ENST00000617901 5305 ntBASIC5.02□□□□□ -1.61
RNF4P78317 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF4P78317 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF4P78317 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
RNF4P78317 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
RNF4P78317 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RNF4P78317 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF4P78317 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF4P78317 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF4P78317 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF4P78317 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNF4P78317 SNORD115-7-201ENST00000365306 82 ntBASIC5.01□□□□□ -1.61
RNF4P78317 Y_RNA.422-201ENST00000384054 114 ntBASIC5.01□□□□□ -1.61
RNF4P78317 RNU6-339P-201ENST00000384310 107 ntBASIC5.01□□□□□ -1.61
RNF4P78317 Y_RNA.576-201ENST00000384781 102 ntBASIC5.01□□□□□ -1.61
RNF4P78317 RNU6-308P-201ENST00000390957 107 ntBASIC5.01□□□□□ -1.61
RNF4P78317 RNA5SP339-201ENST00000390987 122 ntBASIC5.01□□□□□ -1.61
RNF4P78317 RNU11-4P-201ENST00000391149 133 ntBASIC5.01□□□□□ -1.61
RNF4P78317 AL592114.1-201ENST00000403842 483 ntBASIC5.01□□□□□ -1.61
RNF4P78317 RPS4XP9-201ENST00000405151 780 ntBASIC5.01□□□□□ -1.61
RNF4P78317 MIR1286-201ENST00000408112 78 ntBASIC5.01□□□□□ -1.61
RNF4P78317 MIR548K-201ENST00000408406 116 ntBASIC5.01□□□□□ -1.61
RNF4P78317 RN7SKP159-201ENST00000410657 292 ntBASIC5.01□□□□□ -1.61
RNF4P78317 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF4P78317 RPL30P3-201ENST00000424262 333 ntBASIC5.01□□□□□ -1.61
RNF4P78317 MTND3P2-201ENST00000438452 342 ntBASIC5.01□□□□□ -1.61
RNF4P78317 RPL36AP13-201ENST00000457490 317 ntBASIC5.01□□□□□ -1.61
RNF4P78317 RN7SL809P-201ENST00000482040 297 ntBASIC5.01□□□□□ -1.61
RNF4P78317 TRBVA-201ENST00000498804 316 ntBASIC5.01□□□□□ -1.61
RNF4P78317 AC091912.1-201ENST00000511351 248 ntBASIC5.01□□□□□ -1.61
RNF4P78317 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF4P78317 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF4P78317 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF4P78317 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF4P78317 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF4P78317 AP000889.2-201ENST00000532684 490 ntBASIC5.01□□□□□ -1.61
RNF4P78317 AP004607.2-201ENST00000533949 322 ntBASIC5.01□□□□□ -1.61
RNF4P78317 AC090022.1-201ENST00000546569 311 ntBASIC5.01□□□□□ -1.61
RNF4P78317 AL049779.2-201ENST00000553847 315 ntBASIC5.01□□□□□ -1.61
RNF4P78317 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF4P78317 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF4P78317 AC006116.10-201ENST00000591836 581 ntBASIC5.01□□□□□ -1.61
RNF4P78317 AC008737.2-201ENST00000599446 118 ntBASIC5.01□□□□□ -1.61
RNF4P78317 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF4P78317 AP000769.2-201ENST00000602344 396 ntBASIC5.01□□□□□ -1.61
RNF4P78317 AC074101.1-201ENST00000637861 241 ntBASIC5.01□□□□□ -1.61
RNF4P78317 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF4P78317 BDP1P-201ENST00000582658 1990 ntBASIC5.01□□□□□ -1.61
RNF4P78317 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
RNF4P78317 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF4P78317 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF4P78317 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF4P78317 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms