Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AL360181.4-201ENST00000621752 134 ntBASIC3.9□□□□□ -1.79
RPS3AP61247 AL353748.2-201ENST00000622148 471 ntBASIC3.9□□□□□ -1.79
RPS3AP61247 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RPS3AP61247 PCMTD1P7-201ENST00000634506 357 ntBASIC3.9□□□□□ -1.79
RPS3AP61247 MIR6830-201ENST00000636015 70 ntBASIC3.9□□□□□ -1.79
RPS3AP61247 FP325313.1-201ENST00000638228 703 ntBASIC3.9□□□□□ -1.79
RPS3AP61247 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPS3AP61247 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPS3AP61247 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.9□□□□□ -1.79
RPS3AP61247 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
RPS3AP61247 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPS3AP61247 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.89□□□□□ -1.79
RPS3AP61247 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.89□□□□□ -1.79
RPS3AP61247 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 MAPK10-372ENST00000641954 3413 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 OR11H4-201ENST00000315409 1082 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 RNU6-500P-201ENST00000362349 107 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 RNA5SP366-201ENST00000365454 123 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 RNU6-1207P-201ENST00000384343 107 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 SNORD66.1-201ENST00000391230 76 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 RNU2-37P-201ENST00000410695 177 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 RNU2-71P-201ENST00000411395 189 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 MTCO1P17-201ENST00000411522 491 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 RPL23AP26-201ENST00000412728 464 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS3AP61247 HMGB1P11-201ENST00000413899 637 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 DUTP6-201ENST00000425573 462 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.89□□□□□ -1.79
RPS3AP61247 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.89□□□□□ -1.79
RPS3AP61247 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS3AP61247 AL121871.1-201ENST00000443413 436 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.89□□□□□ -1.79
RPS3AP61247 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 RPL5P32-201ENST00000454085 879 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 UQCRHP4-201ENST00000471686 272 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 VN1R17P-201ENST00000472048 1090 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 AC007537.2-201ENST00000472093 511 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 BZW1P2-201ENST00000473537 826 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 RPL30P6-201ENST00000475925 342 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 AC006517.1-201ENST00000480485 328 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 AC110792.1-201ENST00000491826 472 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS3AP61247 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.89□□□□□ -1.79
RPS3AP61247 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS3AP61247 AC017037.2-201ENST00000513850 890 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.89□□□□□ -1.79
RPS3AP61247 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS3AP61247 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.89□□□□□ -1.79
RPS3AP61247 PARP1P2-201ENST00000556806 195 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 TVP23BP1-201ENST00000557500 617 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 MIR3690-201ENST00000580266 75 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 AC013444.2-201ENST00000603317 787 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 AC011451.2-201ENST00000604303 598 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 AC097468.3-201ENST00000607956 456 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.89□□□□□ -1.79
RPS3AP61247 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 AC097655.1-201ENST00000635075 318 ntBASIC3.89□□□□□ -1.79
RPS3AP61247 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RPS3AP61247 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS3AP61247 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RPS3AP61247 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS3AP61247 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPS3AP61247 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPS3AP61247 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
RPS3AP61247 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RPS3AP61247 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RPS3AP61247 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPS3AP61247 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.88□□□□□ -1.79
RPS3AP61247 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
RPS3AP61247 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RPS3AP61247 RNU1-18P-201ENST00000363062 164 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 SNORA70.2-201ENST00000364506 135 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPS3AP61247 RNU11-4P-201ENST00000391149 133 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.88□□□□□ -1.79
RPS3AP61247 HSPE1P26-201ENST00000405341 275 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.88□□□□□ -1.79
RPS3AP61247 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.88□□□□□ -1.79
RPS3AP61247 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.88□□□□□ -1.79
RPS3AP61247 RPL36AP36-201ENST00000418616 301 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 RPL23AP38-201ENST00000423801 469 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 RPL23AP52-201ENST00000439311 478 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.88□□□□□ -1.79
RPS3AP61247 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.88□□□□□ -1.79
RPS3AP61247 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.88□□□□□ -1.79
RPS3AP61247 AP000542.1-201ENST00000448473 371 ntBASIC3.88□□□□□ -1.79
RPS3AP61247 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.88□□□□□ -1.79
RPS3AP61247 SNORD121B-201ENST00000458838 81 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms