Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCLP35914 RNA5SP197-201ENST00000363357 119 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 RNU4-28P-201ENST00000364739 141 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 MIR607-201ENST00000385241 96 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HMGCLP35914 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCLP35914 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCLP35914 SSR1P2-201ENST00000415208 787 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 FCF1P2-201ENST00000415284 583 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 AL356968.1-201ENST00000416622 474 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 ELOCP9-201ENST00000418624 239 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 MTND2P16-201ENST00000419987 799 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 AC007435.1-201ENST00000421086 415 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCLP35914 RPL31P54-201ENST00000429803 370 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 HMGB1P12-201ENST00000438594 598 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCLP35914 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HMGCLP35914 Z73417.1-201ENST00000447373 778 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HMGCLP35914 MRPS31P2-201ENST00000451581 518 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCLP35914 snoU13.7-201ENST00000459220 104 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 RPL5P24-201ENST00000463742 885 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 RPS4XP13-201ENST00000483219 789 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 MTCO3P35-201ENST00000485582 781 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCLP35914 DYNLL1P6-201ENST00000503440 264 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCLP35914 AC110792.2-201ENST00000510278 224 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 AC010265.1-201ENST00000513509 211 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 RN7SKP265-201ENST00000516448 223 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 RNU6-885P-201ENST00000516607 104 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 AP001207.1-201ENST00000524051 481 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 MTCO2P15-201ENST00000532655 656 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 OR6C73P-201ENST00000546432 358 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCLP35914 AC005476.1-201ENST00000554427 397 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.35□□□□□ -1.87
HMGCLP35914 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCLP35914 AC113194.1-201ENST00000606037 500 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 SNORD39.4-201ENST00000620099 78 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCLP35914 AC026634.1-201ENST00000634369 198 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCLP35914 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCLP35914 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCLP35914 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HMGCLP35914 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCLP35914 AC118273.1-201ENST00000525324 3006 ntBASIC3.35□□□□□ -1.87
HMGCLP35914 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCLP35914 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCLP35914 MTCO1P12-201ENST00000414273 1543 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCLP35914 AC093908.1-201ENST00000623125 8092 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCLP35914 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCLP35914 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCLP35914 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCLP35914 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCLP35914 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HMGCLP35914 RNU6-444P-201ENST00000383988 108 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 MIR7-3-201ENST00000384898 110 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 MIR670-201ENST00000390142 98 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HMGCLP35914 RNU6-1242P-201ENST00000391052 103 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 AL121978.1-201ENST00000402778 359 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCLP35914 HSFY4P-201ENST00000415994 1181 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 AC012065.2-201ENST00000421295 375 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCLP35914 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCLP35914 AC097713.2-201ENST00000430199 356 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCLP35914 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCLP35914 AC241584.1-201ENST00000438469 1241 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 EEF1A1P39-201ENST00000440791 250 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 ATP5C1P1-201ENST00000441945 895 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 PRDX3P3-201ENST00000447765 522 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCLP35914 OFD1P3Y-201ENST00000453312 783 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 HMGN3P1-201ENST00000453847 193 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCLP35914 RFC5P1-201ENST00000454419 874 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCLP35914 AC008155.2-201ENST00000464337 397 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 AC011979.1-201ENST00000472300 483 ntBASIC3.34□□□□□ -1.87
HMGCLP35914 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCLP35914 KLRA1P-201ENST00000503499 986 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms