Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MT-TC-201ENST00000387405 66 ntBASIC2.84□□□□□ -1.95
RPA3P35244 RNU6-272P-201ENST00000411028 104 ntBASIC2.84□□□□□ -1.95
RPA3P35244 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.84□□□□□ -1.95
RPA3P35244 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.84□□□□□ -1.95
RPA3P35244 AL590623.1-201ENST00000427864 105 ntBASIC2.84□□□□□ -1.95
RPA3P35244 RPL36AP6-201ENST00000435770 321 ntBASIC2.84□□□□□ -1.95
RPA3P35244 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.84□□□□□ -1.95
RPA3P35244 AC093156.1-201ENST00000440382 670 ntBASIC2.84□□□□□ -1.95
RPA3P35244 CYCSP32-201ENST00000440548 321 ntBASIC2.84□□□□□ -1.95
RPA3P35244 TRIM60P18-201ENST00000441518 828 ntBASIC2.84□□□□□ -1.95
RPA3P35244 RAB11AP1-201ENST00000442978 646 ntBASIC2.84□□□□□ -1.95
RPA3P35244 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.84□□□□□ -1.95
RPA3P35244 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.84□□□□□ -1.95
RPA3P35244 MRPL50P4-201ENST00000446432 475 ntBASIC2.84□□□□□ -1.95
RPA3P35244 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RPA3P35244 RSL24D1P3-201ENST00000449255 495 ntBASIC2.84□□□□□ -1.95
RPA3P35244 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.84□□□□□ -1.95
RPA3P35244 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.84□□□□□ -1.95
RPA3P35244 SNORA9.3-201ENST00000516383 129 ntBASIC2.84□□□□□ -1.95
RPA3P35244 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.84□□□□□ -1.95
RPA3P35244 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.84□□□□□ -1.95
RPA3P35244 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
RPA3P35244 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RPA3P35244 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.84□□□□□ -1.95
RPA3P35244 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
RPA3P35244 AC006963.1-201ENST00000624003 1052 ntBASIC2.84□□□□□ -1.95
RPA3P35244 AL109659.3-201ENST00000624985 950 ntBASIC2.84□□□□□ -1.95
RPA3P35244 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.84□□□□□ -1.95
RPA3P35244 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.84□□□□□ -1.96
RPA3P35244 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPA3P35244 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPA3P35244 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPA3P35244 OR5H2-201ENST00000355273 945 ntBASIC2.83□□□□□ -1.96
RPA3P35244 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RPA3P35244 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
RPA3P35244 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.83□□□□□ -1.96
RPA3P35244 MTND4P24-201ENST00000424002 397 ntBASIC2.83□□□□□ -1.96
RPA3P35244 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.83□□□□□ -1.96
RPA3P35244 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.83□□□□□ -1.96
RPA3P35244 DNAJC19P8-201ENST00000452887 259 ntBASIC2.83□□□□□ -1.96
RPA3P35244 RNF138P1-201ENST00000502765 546 ntBASIC2.83□□□□□ -1.96
RPA3P35244 AC083906.5-201ENST00000503722 328 ntBASIC2.83□□□□□ -1.96
RPA3P35244 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPA3P35244 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.83□□□□□ -1.96
RPA3P35244 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.83□□□□□ -1.96
RPA3P35244 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.83□□□□□ -1.96
RPA3P35244 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.83□□□□□ -1.96
RPA3P35244 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.83□□□□□ -1.96
RPA3P35244 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.83□□□□□ -1.96
RPA3P35244 MIR3200-201ENST00000580767 85 ntBASIC2.83□□□□□ -1.96
RPA3P35244 AC113368.1-201ENST00000603736 382 ntBASIC2.83□□□□□ -1.96
RPA3P35244 HSPE1P14-201ENST00000605812 302 ntBASIC2.83□□□□□ -1.96
RPA3P35244 AL390240.1-201ENST00000612950 384 ntBASIC2.83□□□□□ -1.96
RPA3P35244 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.83□□□□□ -1.96
RPA3P35244 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.83□□□□□ -1.96
RPA3P35244 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.83□□□□□ -1.96
RPA3P35244 AL590396.2-201ENST00000636511 1041 ntBASIC2.83□□□□□ -1.96
RPA3P35244 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.83□□□□□ -1.96
RPA3P35244 AC046144.1-201ENST00000478559 1853 ntBASIC2.83□□□□□ -1.96
RPA3P35244 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPA3P35244 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RPA3P35244 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.83□□□□□ -1.96
RPA3P35244 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
RPA3P35244 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RPA3P35244 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.82□□□□□ -1.96
RPA3P35244 AC083799.1-201ENST00000366451 910 ntBASIC2.82□□□□□ -1.96
RPA3P35244 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RPA3P35244 RNU6-1226P-201ENST00000384317 107 ntBASIC2.82□□□□□ -1.96
RPA3P35244 MIR128-1-201ENST00000384921 82 ntBASIC2.82□□□□□ -1.96
RPA3P35244 MIR483-201ENST00000385070 76 ntBASIC2.82□□□□□ -1.96
RPA3P35244 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RPA3P35244 MIR887-201ENST00000401258 79 ntBASIC2.82□□□□□ -1.96
RPA3P35244 HMGB3P31-201ENST00000413333 595 ntBASIC2.82□□□□□ -1.96
RPA3P35244 YPEL5P1-201ENST00000419731 367 ntBASIC2.82□□□□□ -1.96
RPA3P35244 OFD1P18Y-201ENST00000420889 959 ntBASIC2.82□□□□□ -1.96
RPA3P35244 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.82□□□□□ -1.96
RPA3P35244 ARL2BPP3-201ENST00000421226 480 ntBASIC2.82□□□□□ -1.96
RPA3P35244 AC005189.1-201ENST00000431286 310 ntBASIC2.82□□□□□ -1.96
RPA3P35244 RPS20P5-201ENST00000434808 360 ntBASIC2.82□□□□□ -1.96
RPA3P35244 HMGN2P20-201ENST00000437531 273 ntBASIC2.82□□□□□ -1.96
RPA3P35244 RABEPKP1-201ENST00000440529 1026 ntBASIC2.82□□□□□ -1.96
RPA3P35244 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.82□□□□□ -1.96
RPA3P35244 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.82□□□□□ -1.96
RPA3P35244 RPS26P56-201ENST00000444468 240 ntBASIC2.82□□□□□ -1.96
RPA3P35244 RPL7P59-201ENST00000447700 943 ntBASIC2.82□□□□□ -1.96
RPA3P35244 NANOGNBP1-201ENST00000448444 480 ntBASIC2.82□□□□□ -1.96
RPA3P35244 AL035407.2-201ENST00000454090 378 ntBASIC2.82□□□□□ -1.96
RPA3P35244 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RPA3P35244 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.82□□□□□ -1.96
RPA3P35244 AC111000.2-201ENST00000507775 550 ntBASIC2.82□□□□□ -1.96
RPA3P35244 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.82□□□□□ -1.96
RPA3P35244 AC133963.2-201ENST00000513686 578 ntBASIC2.82□□□□□ -1.96
RPA3P35244 SNORA74D-201ENST00000516404 141 ntBASIC2.82□□□□□ -1.96
RPA3P35244 HPRT1P3-201ENST00000539521 576 ntBASIC2.82□□□□□ -1.96
RPA3P35244 AC092470.1-201ENST00000546187 132 ntBASIC2.82□□□□□ -1.96
RPA3P35244 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.82□□□□□ -1.96
RPA3P35244 AL355836.1-201ENST00000555951 870 ntBASIC2.82□□□□□ -1.96
RPA3P35244 AC067805.1-201ENST00000559344 470 ntBASIC2.82□□□□□ -1.96
RPA3P35244 AC027104.1-201ENST00000563702 681 ntBASIC2.82□□□□□ -1.96
RPA3P35244 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms