Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ZNF415P1-201ENST00000582279 1166 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AC009977.1-201ENST00000586015 570 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AC006130.2-201ENST00000586202 326 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 UBE2L4-201ENST00000587688 464 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 IGHV3-29-201ENST00000604817 344 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 NDUFA8P1-201ENST00000605525 367 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AL589743.7-201ENST00000612637 233 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.09□□□□□ -1.59
CNGA1P29973 AL158801.5-201ENST00000623123 465 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AL359740.1-201ENST00000624340 592 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AC006065.6-201ENST00000625201 545 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 MIR492-201ENST00000638676 116 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CNGA1P29973 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CNGA1P29973 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CNGA1P29973 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CNGA1P29973 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CNGA1P29973 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNGA1P29973 MTND5P33-201ENST00000571250 1450 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CNGA1P29973 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CNGA1P29973 AL592182.3-201ENST00000642132 3304 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CNGA1P29973 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNGA1P29973 MIR331-201ENST00000362302 94 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 SNORA62.3-201ENST00000365110 153 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 MIR670-201ENST00000390142 98 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CNGA1P29973 RN7SKP202-201ENST00000410439 330 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 RNU4-78P-201ENST00000410940 126 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.08□□□□□ -1.6
CNGA1P29973 AIMP1P1-201ENST00000418670 937 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 AL391219.1-201ENST00000422570 483 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.08□□□□□ -1.6
CNGA1P29973 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.08□□□□□ -1.6
CNGA1P29973 HMGB3P9-201ENST00000441799 583 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.08□□□□□ -1.6
CNGA1P29973 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.08□□□□□ -1.6
CNGA1P29973 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.08□□□□□ -1.6
CNGA1P29973 ISCUP1-201ENST00000454451 448 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 SNORD121B-201ENST00000458838 81 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 snoU109.1-201ENST00000459339 135 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 RN7SL132P-201ENST00000478131 296 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.08□□□□□ -1.6
CNGA1P29973 AC021146.3-201ENST00000511911 260 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.08□□□□□ -1.6
CNGA1P29973 RNU6-201P-201ENST00000517100 61 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 AC008694.2-201ENST00000517591 306 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.08□□□□□ -1.6
CNGA1P29973 MTCYBP20-201ENST00000524239 1129 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.08□□□□□ -1.6
CNGA1P29973 AL391156.1-201ENST00000554965 554 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 AC034268.2-201ENST00000571784 482 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 MTND1P15-201ENST00000579262 949 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.08□□□□□ -1.6
CNGA1P29973 AC010680.3-201ENST00000604215 520 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 AL359999.1-201ENST00000604513 294 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 AC006566.1-201ENST00000608943 513 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 Z99129.1-201ENST00000612510 255 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 AC015540.1-201ENST00000615828 501 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.08□□□□□ -1.6
CNGA1P29973 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNGA1P29973 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.08□□□□□ -1.6
CNGA1P29973 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNGA1P29973 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNGA1P29973 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNGA1P29973 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNGA1P29973 AC090337.1-201ENST00000579651 2074 ntBASIC5.08□□□□□ -1.6
CNGA1P29973 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNGA1P29973 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNGA1P29973 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNGA1P29973 AC092125.1-201ENST00000562568 1995 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNGA1P29973 MTND5P29-201ENST00000458676 1807 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 AC008033.1-201ENST00000216407 1162 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNGA1P29973 RNA5SP283-201ENST00000365604 119 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 RNU6-837P-201ENST00000391056 108 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 RNA5SP171-201ENST00000391071 115 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 AL121834.1-202ENST00000404494 277 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 RNA5SP146-201ENST00000410743 123 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.07□□□□□ -1.6
CNGA1P29973 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.07□□□□□ -1.6
CNGA1P29973 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.07□□□□□ -1.6
CNGA1P29973 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.07□□□□□ -1.6
CNGA1P29973 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.07□□□□□ -1.6
CNGA1P29973 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.07□□□□□ -1.6
CNGA1P29973 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.07□□□□□ -1.6
CNGA1P29973 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.07□□□□□ -1.6
CNGA1P29973 SNORD108-201ENST00000459332 71 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 ACTR3P3-201ENST00000480448 893 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 CDC42P4-201ENST00000510507 563 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.07□□□□□ -1.6
CNGA1P29973 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.07□□□□□ -1.6
CNGA1P29973 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.07□□□□□ -1.6
CNGA1P29973 AP003467.2-201ENST00000520175 319 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.07□□□□□ -1.6
CNGA1P29973 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.07□□□□□ -1.6
CNGA1P29973 TVP23BP1-201ENST00000557500 617 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms