Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC010591.1-201ENST00000603941 649 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AL035411.2-201ENST00000604022 421 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC073387.2-201ENST00000604797 784 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC128687.1-201ENST00000605304 619 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC096577.2-201ENST00000611455 153 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC090116.1-201ENST00000615679 446 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC084824.4-201ENST00000620106 731 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 PLCE1P1-201ENST00000622094 305 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AL732618.1-201ENST00000623251 301 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC243312.2-201ENST00000623340 601 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 CR381572.1-201ENST00000625098 102 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.5□□□□□ -1.85
PTPN4P29074 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN4P29074 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.49□□□□□ -1.85
PTPN4P29074 AC130650.2-201ENST00000618736 2403 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN4P29074 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN4P29074 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN4P29074 RNU6-629P-201ENST00000384061 103 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 MIR217-201ENST00000384817 110 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 AL079342.2-201ENST00000403367 482 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 VN1R51P-201ENST00000411675 945 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 FCF1P2-201ENST00000415284 583 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 AC245052.5-201ENST00000416320 649 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 RPF2P1-201ENST00000424137 906 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 Z93242.1-201ENST00000427102 353 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.49□□□□□ -1.85
PTPN4P29074 USP9YP31-201ENST00000431405 881 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 NEK4P1-201ENST00000433383 879 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 RPS3AP12-201ENST00000443616 753 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 RPL21P23-201ENST00000446654 460 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 MTCO1P48-201ENST00000448024 1096 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 AC104073.1-201ENST00000451988 151 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 snoU13.4-201ENST00000458916 104 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 PLGLA-201ENST00000465668 449 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 HMGB1P22-201ENST00000505315 124 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 AC004062.1-201ENST00000509926 645 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 MTCO3P44-201ENST00000510977 541 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 AC074250.1-201ENST00000511117 192 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
PTPN4P29074 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.49□□□□□ -1.85
PTPN4P29074 AC023161.2-201ENST00000551218 780 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 AL121603.1-201ENST00000553815 142 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.49□□□□□ -1.85
PTPN4P29074 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.49□□□□□ -1.85
PTPN4P29074 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.49□□□□□ -1.85
PTPN4P29074 AL022067.1-201ENST00000602426 454 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 ELOCP35-201ENST00000604289 336 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 MIR7975-201ENST00000619350 68 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 AC244258.1-201ENST00000637553 1071 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 MFSD8-245ENST00000641743 948 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 ZNF663P-202ENST00000641770 1131 ntBASIC3.49□□□□□ -1.85
PTPN4P29074 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN4P29074 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN4P29074 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN4P29074 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN4P29074 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.49□□□□□ -1.85
PTPN4P29074 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN4P29074 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN4P29074 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PTPN4P29074 AC002546.1-201ENST00000588041 2504 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN4P29074 Z99496.1-201ENST00000469424 1477 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN4P29074 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN4P29074 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN4P29074 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN4P29074 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN4P29074 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN4P29074 MIR148B-201ENST00000362252 99 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 RNU6-492P-201ENST00000363035 104 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 RNU5E-10P-201ENST00000363506 118 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 SUGT1P1-201ENST00000379514 476 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PTPN4P29074 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN4P29074 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN4P29074 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.48□□□□□ -1.85
PTPN4P29074 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN4P29074 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN4P29074 AC005345.1-201ENST00000431868 217 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 AL590103.1-201ENST00000434488 307 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.48□□□□□ -1.85
PTPN4P29074 FTH1P1-201ENST00000437933 532 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN4P29074 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN4P29074 AC104978.1-201ENST00000449387 391 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 AC073387.1-201ENST00000453261 709 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 AP002884.2-201ENST00000471647 395 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 WBP1LP4-201ENST00000505043 344 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.48□□□□□ -1.85
PTPN4P29074 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN4P29074 AC027309.2-201ENST00000520566 192 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN4P29074 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN4P29074 OR7E13P-201ENST00000526052 910 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 AP001189.2-201ENST00000527320 189 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 AP000790.1-201ENST00000528891 737 ntBASIC3.48□□□□□ -1.85
PTPN4P29074 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN4P29074 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN4P29074 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms