Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC018754.1-201ENST00000607486 925 ntBASIC2.25□□□□□ -2.05
FREM3P0C091 AC025034.2-201ENST00000623264 286 ntBASIC2.25□□□□□ -2.05
FREM3P0C091 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.25□□□□□ -2.05
FREM3P0C091 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
FREM3P0C091 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
FREM3P0C091 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
FREM3P0C091 DEFA7P-201ENST00000382676 285 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
FREM3P0C091 RN7SKP192-201ENST00000411291 327 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 AC080125.1-201ENST00000414888 684 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 MTND2P16-201ENST00000419987 799 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 OOSP1P1-201ENST00000423265 274 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 TRIAP1P1-201ENST00000427062 225 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 FCF1P1-201ENST00000432690 571 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 OR6C72P-201ENST00000451403 892 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.24□□□□□ -2.05
FREM3P0C091 ACTR6P1-201ENST00000514311 1104 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.24□□□□□ -2.05
FREM3P0C091 AP004242.1-201ENST00000533701 349 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.24□□□□□ -2.05
FREM3P0C091 AP003117.1-201ENST00000602771 554 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 BNIP3P10-201ENST00000605360 577 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 AC068722.2-201ENST00000618734 544 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.24□□□□□ -2.05
FREM3P0C091 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.24□□□□□ -2.05
FREM3P0C091 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
FREM3P0C091 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
FREM3P0C091 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
FREM3P0C091 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
FREM3P0C091 AC138915.3-201ENST00000562908 1389 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.24□□□□□ -2.05
FREM3P0C091 NPM1P49-201ENST00000448027 714 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 AC092754.2-201ENST00000463506 460 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.24□□□□□ -2.05
FREM3P0C091 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.24□□□□□ -2.05
FREM3P0C091 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
FREM3P0C091 EIF5A2P1-201ENST00000564027 460 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 AC007336.1-201ENST00000576365 3828 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 AL391834.1-201ENST00000609609 560 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 XIST_intron.1-201ENST00000619444 68 ntBASIC2.24□□□□□ -2.05
FREM3P0C091 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.24□□□□□ -2.05
FREM3P0C091 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.24□□□□□ -2.05
FREM3P0C091 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
FREM3P0C091 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.23□□□□□ -2.05
FREM3P0C091 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
FREM3P0C091 SNORA41-201ENST00000384675 132 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 RPS4XP7-201ENST00000406274 780 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.23□□□□□ -2.05
FREM3P0C091 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.23□□□□□ -2.05
FREM3P0C091 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.23□□□□□ -2.05
FREM3P0C091 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.23□□□□□ -2.05
FREM3P0C091 AL035407.1-201ENST00000429211 571 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.23□□□□□ -2.05
FREM3P0C091 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.23□□□□□ -2.05
FREM3P0C091 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.23□□□□□ -2.05
FREM3P0C091 AC133134.1-201ENST00000466800 359 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 ANXA2P1-201ENST00000505539 926 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 SNORA31.1-201ENST00000515993 133 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 SNORA31.5-201ENST00000516190 133 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 SNORD116-30-201ENST00000516468 85 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 SNORA31.15-201ENST00000516771 132 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.23□□□□□ -2.05
FREM3P0C091 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
FREM3P0C091 FAM35BP-202ENST00000497389 3337 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
FREM3P0C091 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
FREM3P0C091 AL162578.1-201ENST00000406202 378 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.23□□□□□ -2.05
FREM3P0C091 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.23□□□□□ -2.05
FREM3P0C091 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.23□□□□□ -2.05
FREM3P0C091 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.23□□□□□ -2.05
FREM3P0C091 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.23□□□□□ -2.05
FREM3P0C091 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.23□□□□□ -2.05
FREM3P0C091 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.23□□□□□ -2.05
FREM3P0C091 CKS1BP1-201ENST00000555221 240 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 SNORD53-201ENST00000579969 78 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.23□□□□□ -2.05
FREM3P0C091 AC007938.3-201ENST00000604965 623 ntBASIC2.23□□□□□ -2.05
FREM3P0C091 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
FREM3P0C091 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
FREM3P0C091 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
FREM3P0C091 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
FREM3P0C091 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
FREM3P0C091 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
FREM3P0C091 SNORA26.7-201ENST00000391288 122 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 AL445529.1-201ENST00000398713 389 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.22□□□□□ -2.05
FREM3P0C091 XKRYP4-201ENST00000414395 483 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 RPS20P5-201ENST00000434808 360 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 AC018634.1-201ENST00000437554 401 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 XKRYP5-201ENST00000449659 483 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 RPL9P32-201ENST00000464118 620 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.22□□□□□ -2.05
FREM3P0C091 RN7SKP82-201ENST00000516786 223 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.22□□□□□ -2.05
FREM3P0C091 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.22□□□□□ -2.05
FREM3P0C091 AP000867.2-201ENST00000532468 320 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.22□□□□□ -2.05
FREM3P0C091 AC069304.3-201ENST00000603938 1084 ntBASIC2.22□□□□□ -2.05
FREM3P0C091 AC091488.1-201ENST00000604239 660 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms