Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 DPRXP5-201ENST00000604662 539 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC073387.2-201ENST00000604797 784 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC090425.2-201ENST00000608818 501 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AP001521.1-201ENST00000609150 300 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC019176.2-201ENST00000611579 315 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 RNA5SP196-201ENST00000625967 102 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 LRRC77P-213ENST00000637727 880 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 ZNF663P-202ENST00000641770 1131 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC007256.1-201ENST00000392253 2765 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RNU6-224P-201ENST00000384055 107 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 Y_RNA.578-201ENST00000390903 88 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RNU6-821P-201ENST00000390995 107 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 SNORA57.1-201ENST00000391227 145 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AL024474.1-201ENST00000404655 591 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RPL23AP47-201ENST00000408017 460 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC092447.6-201ENST00000414578 210 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RAD23BP2-201ENST00000416003 1207 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AL449283.1-202ENST00000418249 604 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RPL7P46-201ENST00000425129 740 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 MTCO1P3-201ENST00000429327 192 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC012497.1-201ENST00000429392 575 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AL590103.1-201ENST00000434488 307 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RPS24P6-201ENST00000452670 400 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RPS20P24-201ENST00000457473 361 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RPL5P24-201ENST00000463742 885 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 HMGB1P25-201ENST00000468402 607 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 VN1R17P-201ENST00000472048 1090 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 OR4G11P-201ENST00000492842 939 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RN7SKP43-201ENST00000516173 320 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 OR4P1P-201ENST00000530808 1136 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 SYF2P1-201ENST00000550658 413 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC126177.3-201ENST00000551839 688 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 MTCYBP27-201ENST00000555160 670 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 HSPE1P5-201ENST00000561489 272 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC138915.2-201ENST00000569776 97 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 MIR3160-1-201ENST00000577972 85 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AL355812.1-201ENST00000603215 216 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC024060.1-201ENST00000607052 494 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC010975.3-201ENST00000618727 978 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AL158163.2-201ENST00000619110 700 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AL049777.1-201ENST00000622740 518 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC010872.1-201ENST00000624225 675 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AP003485.1-201ENST00000625093 753 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC004808.1-201ENST00000627671 721 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AC099654.8-201ENST00000637757 681 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DQA1P01909 MTND5P24-201ENST00000438892 1767 ntBASIC2.49□□□□□ -2.01
HLA-DQA1P01909 NUP58P1-201ENST00000502546 1738 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 Z99496.1-201ENST00000469424 1477 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 FRG1CP-201ENST00000358464 769 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 RNA5SP295-201ENST00000362655 121 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 SNORA51.2-201ENST00000364595 132 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 U3.29-201ENST00000391296 212 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 RPL31P1-201ENST00000398116 372 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms