Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNU4-21P-201ENST00000362802 126 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 SNORA7.2-201ENST00000364446 145 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-2O95096 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-2O95096 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NKX2-2O95096 SNORA26.8-201ENST00000391306 124 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 RPS3AP26-201ENST00000398259 784 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 RNA5SP306-201ENST00000411087 107 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.75□□□□□ -1.81
NKX2-2O95096 HSPE1P12-201ENST00000412576 301 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-2O95096 RAD23BP2-201ENST00000416003 1207 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-2O95096 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-2O95096 AC098826.1-201ENST00000433943 471 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC129850.1-201ENST00000436203 508 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC108734.1-201ENST00000439549 399 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC069285.2-201ENST00000440210 275 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 H2AFZP6-201ENST00000444403 394 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-2O95096 BMI1P1-201ENST00000445879 941 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.75□□□□□ -1.81
NKX2-2O95096 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-2O95096 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-2O95096 AC104308.1-201ENST00000454621 333 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AL122001.1-201ENST00000457027 370 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC092754.2-201ENST00000463506 460 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC010469.1-201ENST00000463864 576 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC021382.1-201ENST00000483523 359 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AL024509.2-201ENST00000493462 493 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 RPL31P61-201ENST00000496160 376 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC113430.1-201ENST00000506872 718 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-2O95096 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-2O95096 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-2O95096 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-2O95096 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-2O95096 HIGD1AP10-201ENST00000527837 282 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AP003497.1-201ENST00000528472 562 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 CR383656.7-201ENST00000548164 174 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC126177.3-201ENST00000551839 688 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-2O95096 AC025884.1-201ENST00000556034 378 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC022916.3-201ENST00000592961 742 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-2O95096 AC008638.3-201ENST00000603341 463 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC092653.1-201ENST00000608509 531 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC012360.2-201ENST00000609349 391 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AC002550.2-201ENST00000621246 394 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.75□□□□□ -1.81
NKX2-2O95096 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
NKX2-2O95096 PNPT1P2-201ENST00000456768 2050 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-2O95096 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-2O95096 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-2O95096 AL353746.1-201ENST00000566293 6881 ntBASIC3.75□□□□□ -1.81
NKX2-2O95096 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-2O95096 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
NKX2-2O95096 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NKX2-2O95096 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-2O95096 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-2O95096 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-2O95096 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-2O95096 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-2O95096 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-2O95096 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-2O95096 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-2O95096 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NKX2-2O95096 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-2O95096 RNU6-97P-201ENST00000363387 104 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 RNU6-1155P-201ENST00000363554 107 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 RNU6-853P-201ENST00000364306 107 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 Y_RNA.548-201ENST00000384656 105 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 AL138880.1-201ENST00000405824 642 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 RNA5SP239-201ENST00000410218 129 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 RNU2-47P-201ENST00000410649 186 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-2O95096 AC109780.2-201ENST00000413467 845 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-2O95096 JKAMPP1-201ENST00000413804 919 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 TOMM22P1-201ENST00000418578 312 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 Z97055.1-201ENST00000419730 712 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-2O95096 AC109583.1-201ENST00000432156 268 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 RPS6P12-201ENST00000432491 726 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 AC096638.2-201ENST00000434965 711 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 RPL37P21-201ENST00000435890 276 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 NPM1P49-201ENST00000448027 714 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 EPS15P1-201ENST00000448836 336 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 AC009220.1-201ENST00000451614 275 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-2O95096 FABP3P2-201ENST00000453169 399 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 AC073387.1-201ENST00000453261 709 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-2O95096 RPS23P7-201ENST00000466210 444 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 AC026979.1-201ENST00000492525 396 ntBASIC3.74□□□□□ -1.81
NKX2-2O95096 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-2O95096 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-2O95096 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-2O95096 AC023141.12-201ENST00000512399 199 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms