Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF40O75150 HMGB3P24-201ENST00000433260 622 ntBASIC6.62□□□□□ -1.35
RNF40O75150 RPL23AP22-201ENST00000437556 453 ntBASIC6.62□□□□□ -1.35
RNF40O75150 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.62□□□□□ -1.35
RNF40O75150 REG1CP-206ENST00000447469 496 ntBASIC6.62□□□□□ -1.35
RNF40O75150 PPIAP20-201ENST00000449839 135 ntBASIC6.62□□□□□ -1.35
RNF40O75150 AC009963.3-201ENST00000458090 486 ntBASIC6.62□□□□□ -1.35
RNF40O75150 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF40O75150 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RNF40O75150 NDUFB4P9-201ENST00000511646 388 ntBASIC6.62□□□□□ -1.35
RNF40O75150 Y_RNA.713-201ENST00000517013 96 ntBASIC6.62□□□□□ -1.35
RNF40O75150 AC144568.1-201ENST00000520139 137 ntBASIC6.62□□□□□ -1.35
RNF40O75150 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF40O75150 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF40O75150 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF40O75150 MIR6085-201ENST00000618314 110 ntBASIC6.62□□□□□ -1.35
RNF40O75150 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF40O75150 AP001784.1-201ENST00000624107 428 ntBASIC6.62□□□□□ -1.35
RNF40O75150 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RNF40O75150 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RNF40O75150 HSPA8P4-201ENST00000511877 1920 ntBASIC6.62□□□□□ -1.35
RNF40O75150 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF40O75150 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF40O75150 GUCY1B2-204ENST00000531898 1979 ntBASIC6.61□□□□□ -1.35
RNF40O75150 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF40O75150 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF40O75150 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
RNF40O75150 COX6B1P3-201ENST00000312310 260 ntBASIC6.61□□□□□ -1.35
RNF40O75150 AC138393.1-203ENST00000327086 343 ntBASIC6.61□□□□□ -1.35
RNF40O75150 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RNF40O75150 RN7SKP78-201ENST00000364711 318 ntBASIC6.61□□□□□ -1.35
RNF40O75150 RNU6-1329P-201ENST00000365664 107 ntBASIC6.61□□□□□ -1.35
RNF40O75150 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RNF40O75150 U3.43-201ENST00000410734 213 ntBASIC6.61□□□□□ -1.35
RNF40O75150 RN7SKP17-201ENST00000411242 351 ntBASIC6.61□□□□□ -1.35
RNF40O75150 AL354868.1-201ENST00000417077 482 ntBASIC6.61□□□□□ -1.35
RNF40O75150 AL354766.1-201ENST00000423396 542 ntBASIC6.61□□□□□ -1.35
RNF40O75150 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF40O75150 AL445305.1-201ENST00000432577 575 ntBASIC6.61□□□□□ -1.35
RNF40O75150 PNKDP1-201ENST00000435914 430 ntBASIC6.61□□□□□ -1.35
RNF40O75150 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF40O75150 AC068228.1-201ENST00000461723 211 ntBASIC6.61□□□□□ -1.35
RNF40O75150 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF40O75150 Y_RNA.687-201ENST00000516558 91 ntBASIC6.61□□□□□ -1.35
RNF40O75150 CDH12P4-201ENST00000517835 295 ntBASIC6.61□□□□□ -1.35
RNF40O75150 CDH12P3-201ENST00000517935 295 ntBASIC6.61□□□□□ -1.35
RNF40O75150 CDH12P1-201ENST00000518435 295 ntBASIC6.61□□□□□ -1.35
RNF40O75150 AC024405.2-202ENST00000532731 184 ntBASIC6.61□□□□□ -1.35
RNF40O75150 AC004024.1-201ENST00000549244 247 ntBASIC6.61□□□□□ -1.35
RNF40O75150 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.61□□□□□ -1.35
RNF40O75150 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF40O75150 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF40O75150 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF40O75150 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RNF40O75150 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF40O75150 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF40O75150 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF40O75150 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF40O75150 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF40O75150 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF40O75150 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF40O75150 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
RNF40O75150 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF40O75150 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
RNF40O75150 AC092692.1-201ENST00000623625 2595 ntBASIC6.61□□□□□ -1.35
RNF40O75150 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF40O75150 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
RNF40O75150 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF40O75150 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
RNF40O75150 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF40O75150 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF40O75150 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF40O75150 XIAPP3-201ENST00000312918 795 ntBASIC6.6□□□□□ -1.35
RNF40O75150 RNU1-76P-201ENST00000362903 159 ntBASIC6.6□□□□□ -1.35
RNF40O75150 RNU6-1284P-201ENST00000363701 100 ntBASIC6.6□□□□□ -1.35
RNF40O75150 SNORD115-46-201ENST00000390982 71 ntBASIC6.6□□□□□ -1.35
RNF40O75150 AC130360.1-201ENST00000425489 1117 ntBASIC6.6□□□□□ -1.35
RNF40O75150 DAP3P1-201ENST00000441522 278 ntBASIC6.6□□□□□ -1.35
RNF40O75150 RPS17P13-201ENST00000448974 407 ntBASIC6.6□□□□□ -1.35
RNF40O75150 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF40O75150 RN7SL717P-201ENST00000478343 297 ntBASIC6.6□□□□□ -1.35
RNF40O75150 RN7SL432P-201ENST00000484057 298 ntBASIC6.6□□□□□ -1.35
RNF40O75150 AC069499.1-201ENST00000489433 509 ntBASIC6.6□□□□□ -1.35
RNF40O75150 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF40O75150 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF40O75150 RNU6-479P-201ENST00000516348 105 ntBASIC6.6□□□□□ -1.35
RNF40O75150 RNA5SP206-201ENST00000516703 121 ntBASIC6.6□□□□□ -1.35
RNF40O75150 IGKV2-38-201ENST00000517443 247 ntBASIC6.6□□□□□ -1.35
RNF40O75150 IGKV3D-34-201ENST00000522638 302 ntBASIC6.6□□□□□ -1.35
RNF40O75150 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF40O75150 MRPS36P4-201ENST00000534436 298 ntBASIC6.6□□□□□ -1.35
RNF40O75150 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms