Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC104073.1-201ENST00000451988 151 ntBASIC3.19□□□□□ -1.9
HCN1O60741 NPM1P13-201ENST00000452663 865 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN1O60741 snoU13.24-201ENST00000458998 104 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
HCN1O60741 CAB39P1-201ENST00000502277 460 ntBASIC3.19□□□□□ -1.9
HCN1O60741 DYNLL1P6-201ENST00000503440 264 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC114967.1-201ENST00000504890 259 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN1O60741 MTCYBP37-201ENST00000510642 1133 ntBASIC3.19□□□□□ -1.9
HCN1O60741 MTCO3P44-201ENST00000510977 541 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN1O60741 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.19□□□□□ -1.9
HCN1O60741 SNORA70.18-201ENST00000516696 98 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN1O60741 MTCO3P15-201ENST00000526563 574 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC019227.1-201ENST00000526902 510 ntBASIC3.19□□□□□ -1.9
HCN1O60741 NDUFS5P6-201ENST00000529136 295 ntBASIC3.19□□□□□ -1.9
HCN1O60741 OR4A45P-201ENST00000529954 901 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN1O60741 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.19□□□□□ -1.9
HCN1O60741 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN1O60741 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN1O60741 TRAV37-201ENST00000553906 342 ntBASIC3.19□□□□□ -1.9
HCN1O60741 NCAPGP2-201ENST00000557911 754 ntBASIC3.19□□□□□ -1.9
HCN1O60741 MIR5186-201ENST00000577504 120 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC025588.3-201ENST00000604182 274 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC096577.2-201ENST00000611455 153 ntBASIC3.19□□□□□ -1.9
HCN1O60741 RNU6-1192P-201ENST00000612197 107 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AL390240.1-201ENST00000612950 384 ntBASIC3.19□□□□□ -1.9
HCN1O60741 RNU6-489P-201ENST00000618289 107 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC068722.2-201ENST00000618734 544 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC006963.1-201ENST00000624003 1052 ntBASIC3.19□□□□□ -1.9
HCN1O60741 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN1O60741 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
HCN1O60741 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN1O60741 AL355578.1-201ENST00000607405 1328 ntBASIC3.19□□□□□ -1.9
HCN1O60741 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN1O60741 AC073346.2-201ENST00000624724 2058 ntBASIC3.18□□□□□ -1.9
HCN1O60741 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN1O60741 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN1O60741 RNU6-525P-201ENST00000363685 104 ntBASIC3.18□□□□□ -1.9
HCN1O60741 RNU6-263P-201ENST00000363811 107 ntBASIC3.18□□□□□ -1.9
HCN1O60741 RNU1-33P-201ENST00000364249 162 ntBASIC3.18□□□□□ -1.9
HCN1O60741 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN1O60741 RNU6-298P-201ENST00000390888 96 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AL583834.1-201ENST00000406943 343 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AL133264.1-201ENST00000407157 562 ntBASIC3.18□□□□□ -1.9
HCN1O60741 RN7SKP53-201ENST00000411337 315 ntBASIC3.18□□□□□ -1.9
HCN1O60741 HMGB3P23-201ENST00000414981 585 ntBASIC3.18□□□□□ -1.9
HCN1O60741 OFD1P18Y-201ENST00000420889 959 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AL158156.1-201ENST00000422509 473 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN1O60741 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN1O60741 AC011242.1-201ENST00000433596 1158 ntBASIC3.18□□□□□ -1.9
HCN1O60741 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN1O60741 RPS24P6-201ENST00000452670 400 ntBASIC3.18□□□□□ -1.9
HCN1O60741 HMGB1P15-201ENST00000453854 435 ntBASIC3.18□□□□□ -1.9
HCN1O60741 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
HCN1O60741 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
HCN1O60741 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN1O60741 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN1O60741 HMGB1P22-201ENST00000505315 124 ntBASIC3.18□□□□□ -1.9
HCN1O60741 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN1O60741 MTND4LP22-201ENST00000508209 276 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AC010265.1-201ENST00000513509 211 ntBASIC3.18□□□□□ -1.9
HCN1O60741 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN1O60741 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
HCN1O60741 RNA5SP468-201ENST00000516782 93 ntBASIC3.18□□□□□ -1.9
HCN1O60741 RN7SKP116-201ENST00000516902 319 ntBASIC3.18□□□□□ -1.9
HCN1O60741 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN1O60741 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.18□□□□□ -1.9
HCN1O60741 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN1O60741 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN1O60741 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN1O60741 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HCN1O60741 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.18□□□□□ -1.9
HCN1O60741 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
HCN1O60741 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN1O60741 AC011611.1-201ENST00000552179 197 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.18□□□□□ -1.9
HCN1O60741 OR4T1P-201ENST00000554933 911 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN1O60741 BNIP3P27-201ENST00000599991 412 ntBASIC3.18□□□□□ -1.9
HCN1O60741 GAS5-AS1-201ENST00000602767 694 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AP003973.1-201ENST00000604639 691 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AC093673.2-201ENST00000609674 331 ntBASIC3.18□□□□□ -1.9
HCN1O60741 AL354976.1-201ENST00000613843 387 ntBASIC3.18□□□□□ -1.9
HCN1O60741 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN1O60741 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.18□□□□□ -1.9
HCN1O60741 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN1O60741 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HCN1O60741 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN1O60741 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN1O60741 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN1O60741 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN1O60741 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.17□□□□□ -1.9
HCN1O60741 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms