Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 Y_RNA.569-201ENST00000384749 103 ntBASIC6□□□□□ -1.45
GFRA3O60609 AC013442.1-201ENST00000397347 228 ntBASIC6□□□□□ -1.45
GFRA3O60609 MIR513C-201ENST00000401352 84 ntBASIC6□□□□□ -1.45
GFRA3O60609 AL591034.2-201ENST00000402839 359 ntBASIC6□□□□□ -1.45
GFRA3O60609 RNA5SP494-201ENST00000410653 129 ntBASIC6□□□□□ -1.45
GFRA3O60609 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6□□□□□ -1.45
GFRA3O60609 PSMD10P3-201ENST00000437000 448 ntBASIC6□□□□□ -1.45
GFRA3O60609 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6□□□□□ -1.45
GFRA3O60609 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6□□□□□ -1.45
GFRA3O60609 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 AC020890.1-201ENST00000491837 504 ntBASIC6□□□□□ -1.45
GFRA3O60609 RNU6-1092P-201ENST00000516955 87 ntBASIC6□□□□□ -1.45
GFRA3O60609 AC091144.1-201ENST00000519573 138 ntBASIC6□□□□□ -1.45
GFRA3O60609 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6□□□□□ -1.45
GFRA3O60609 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6□□□□□ -1.45
GFRA3O60609 AC012254.3-201ENST00000591183 2117 ntBASIC6□□□□□ -1.45
GFRA3O60609 AC023043.3-201ENST00000593113 385 ntBASIC6□□□□□ -1.45
GFRA3O60609 MIR7159-201ENST00000620587 66 ntBASIC6□□□□□ -1.45
GFRA3O60609 FP236240.3-201ENST00000623061 327 ntBASIC6□□□□□ -1.45
GFRA3O60609 AP001642.1-201ENST00000624727 2117 ntBASIC6□□□□□ -1.45
GFRA3O60609 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
GFRA3O60609 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6□□□□□ -1.45
GFRA3O60609 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6□□□□□ -1.45
GFRA3O60609 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6□□□□□ -1.45
GFRA3O60609 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6□□□□□ -1.45
GFRA3O60609 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC6□□□□□ -1.45
GFRA3O60609 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6□□□□□ -1.45
GFRA3O60609 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 AL596211.1-201ENST00000569873 2277 ntBASIC6□□□□□ -1.45
GFRA3O60609 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6□□□□□ -1.45
GFRA3O60609 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6□□□□□ -1.45
GFRA3O60609 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
GFRA3O60609 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
GFRA3O60609 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
GFRA3O60609 GNL2P1-201ENST00000451274 2190 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 AC024651.2-201ENST00000562480 2098 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
GFRA3O60609 RNA5SP500-201ENST00000364486 119 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 SNORA51.6-201ENST00000384151 125 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 AC008280.1-201ENST00000418851 412 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 NME1P1-201ENST00000420914 382 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 AC245028.1-201ENST00000423259 256 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 RN7SL222P-201ENST00000476452 299 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 RPS18P6-201ENST00000476880 458 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 RPS27AP9-201ENST00000477681 438 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 RN7SL481P-201ENST00000477764 299 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.99□□□□□ -1.45
GFRA3O60609 AC093853.1-201ENST00000515689 483 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 RNU6-1012P-201ENST00000516606 109 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 SNORA27.4-201ENST00000516650 95 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 DEFB131C-201ENST00000528817 165 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.99□□□□□ -1.45
GFRA3O60609 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA3O60609 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA3O60609 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.99□□□□□ -1.45
GFRA3O60609 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA3O60609 AL049794.2-201ENST00000616301 365 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 AC004825.2-201ENST00000616634 455 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 AL662795.2-201ENST00000624252 3706 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
GFRA3O60609 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA3O60609 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA3O60609 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 AC092111.1-201ENST00000618256 3358 ntBASIC5.99□□□□□ -1.45
GFRA3O60609 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA3O60609 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA3O60609 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA3O60609 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
GFRA3O60609 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
GFRA3O60609 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA3O60609 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
GFRA3O60609 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC5.98□□□□□ -1.45
GFRA3O60609 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 AC025470.1-201ENST00000510053 2032 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA3O60609 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 RPL23P2-201ENST00000320371 421 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 SNORA25.1-201ENST00000362326 128 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms