Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC040168.1-201ENST00000623594 991 ntBASIC3.53□□□□□ -1.84
CLDN3O15551 AL512506.2-201ENST00000624472 458 ntBASIC3.53□□□□□ -1.84
CLDN3O15551 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN3O15551 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN3O15551 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN3O15551 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
CLDN3O15551 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CLDN3O15551 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN3O15551 DBF4P1-201ENST00000412976 1892 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN3O15551 AC116096.1-201ENST00000566804 2314 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN3O15551 SNORA63.3-201ENST00000362682 132 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 RNU6-839P-201ENST00000363347 108 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 SKINT1L-201ENST00000401057 817 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 RNA5SP107-201ENST00000411358 122 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN3O15551 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN3O15551 RPS20P24-201ENST00000457473 361 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 AC010468.1-201ENST00000461022 817 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN3O15551 PABPC1P3-201ENST00000469174 459 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 AC109925.1-201ENST00000478069 331 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 VPS26AP1-201ENST00000483197 979 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
CLDN3O15551 AC084024.2-201ENST00000503480 791 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN3O15551 AP003355.1-201ENST00000518956 587 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN3O15551 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN3O15551 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.52□□□□□ -1.85
CLDN3O15551 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN3O15551 AC006518.1-201ENST00000541449 943 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 AC004024.1-201ENST00000549244 247 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 AC087481.2-201ENST00000565492 330 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN3O15551 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN3O15551 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN3O15551 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN3O15551 AC018926.1-201ENST00000616335 435 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN3O15551 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.52□□□□□ -1.85
CLDN3O15551 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN3O15551 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN3O15551 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN3O15551 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN3O15551 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN3O15551 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN3O15551 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN3O15551 AF117829.1-206ENST00000621883 3802 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN3O15551 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN3O15551 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CLDN3O15551 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CLDN3O15551 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN3O15551 MCTS2P-201ENST00000394552 546 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN3O15551 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN3O15551 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 AL353678.1-201ENST00000422735 741 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 MTCYBP32-201ENST00000427945 1084 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 RPL31P54-201ENST00000429803 370 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN3O15551 TXNP1-201ENST00000441872 371 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 RPS3AP12-201ENST00000443616 753 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN3O15551 AC092754.2-201ENST00000463506 460 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 GAPDHP39-201ENST00000481866 979 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN3O15551 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN3O15551 NAMPTP2-201ENST00000505629 1115 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN3O15551 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN3O15551 AC104027.1-201ENST00000521887 300 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 OR4P1P-201ENST00000530808 1136 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN3O15551 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN3O15551 AC126177.3-201ENST00000551839 688 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN3O15551 MTND4LP25-201ENST00000570218 163 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 MIR2682-201ENST00000580305 110 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN3O15551 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN3O15551 AP003973.1-201ENST00000604639 691 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 AP005137.2-201ENST00000609238 400 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 AC008759.3-201ENST00000613300 508 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 VN1R7P-201ENST00000619242 903 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 AC092650.2-201ENST00000619984 902 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 PLCE1P1-201ENST00000622094 305 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 AC068880.4-201ENST00000623082 495 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN3O15551 MIR3651-201ENST00000630427 90 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN3O15551 MTND4P34-201ENST00000572715 1371 ntBASIC3.51□□□□□ -1.85
CLDN3O15551 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN3O15551 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CLDN3O15551 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLDN3O15551 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN3O15551 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms