Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC006065.5-201ENST00000623427 349 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
HMGN4O00479 AP003072.4-201ENST00000624580 310 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 AL121594.5-201ENST00000631724 573 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.09□□□□□ -2.08
HMGN4O00479 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGN4O00479 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGN4O00479 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HMGN4O00479 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HMGN4O00479 SNORA36C-201ENST00000384289 132 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 SNORA80E-201ENST00000384744 137 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HMGN4O00479 CCNB2P1-201ENST00000399411 1150 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 NDUFB4P4-201ENST00000404822 243 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 OR4K6P-201ENST00000416478 897 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AC093084.1-201ENST00000424233 687 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGN4O00479 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGN4O00479 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGN4O00479 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGN4O00479 VN1R48P-201ENST00000448149 1036 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGN4O00479 AP001486.1-201ENST00000463339 476 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGN4O00479 AC004263.1-201ENST00000479327 332 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGN4O00479 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.08□□□□□ -2.08
HMGN4O00479 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGN4O00479 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HMGN4O00479 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGN4O00479 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HMGN4O00479 PRELID2P1-201ENST00000552837 301 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AC106782.4-201ENST00000568264 210 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGN4O00479 MIR4474-201ENST00000579189 78 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.08□□□□□ -2.08
HMGN4O00479 AC011471.1-201ENST00000585766 187 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AL133393.1-201ENST00000603277 287 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AC105429.2-201ENST00000610567 517 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AC013562.2-201ENST00000611632 603 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AC009831.4-201ENST00000620744 325 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AC007998.5-201ENST00000622938 237 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGN4O00479 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 AC008432.1-201ENST00000615912 1320 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 MAPK10-322ENST00000641485 4530 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGN4O00479 AL157700.1-201ENST00000561973 1432 ntBASIC2.08□□□□□ -2.08
HMGN4O00479 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HMGN4O00479 AL136360.1-201ENST00000503377 1900 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
HMGN4O00479 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.07□□□□□ -2.08
HMGN4O00479 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HMGN4O00479 RNA5SP289-201ENST00000362332 137 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGN4O00479 SNORA67.4-201ENST00000384688 142 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 RPL31P2-201ENST00000413849 377 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 TRGV6-201ENST00000417928 299 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
HMGN4O00479 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGN4O00479 HMGN2P20-201ENST00000437531 273 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 RPS15AP1-201ENST00000457423 391 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HMGN4O00479 GZMAP1-201ENST00000503054 631 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGN4O00479 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGN4O00479 RN7SKP282-201ENST00000516824 299 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.07□□□□□ -2.08
HMGN4O00479 AP001646.1-201ENST00000527936 915 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.07□□□□□ -2.08
HMGN4O00479 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGN4O00479 SETP2-201ENST00000553886 926 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
HMGN4O00479 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGN4O00479 AC025034.2-201ENST00000623264 286 ntBASIC2.07□□□□□ -2.08
HMGN4O00479 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGN4O00479 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
HMGN4O00479 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
HMGN4O00479 AC012321.1-201ENST00000561622 1588 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 AL136164.4-201ENST00000625013 2135 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HMGN4O00479 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HMGN4O00479 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HMGN4O00479 VTRNA1-1-201ENST00000363120 99 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 RNU6-1331P-201ENST00000363658 106 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 MIR221-201ENST00000385135 110 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGN4O00479 HMGB1P11-201ENST00000413899 637 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGN4O00479 AL353898.1-201ENST00000444055 238 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.06□□□□□ -2.08
HMGN4O00479 RPL23AP20-201ENST00000447965 421 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 AC069277.2-201ENST00000454211 432 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 snoU13.24-201ENST00000458998 104 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 RPL21P8-201ENST00000465083 535 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 AL049873.1-201ENST00000480540 376 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGN4O00479 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.06□□□□□ -2.08
HMGN4O00479 AC114781.4-201ENST00000513707 639 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms