Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RAC1P7-201ENST00000445367 377 ntBASIC4.87□□□□□ -1.63
CBX4O00257 RPL29P29-201ENST00000448725 423 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC108059.3-201ENST00000456388 214 ntBASIC4.87□□□□□ -1.63
CBX4O00257 snoU13.1-201ENST00000459157 104 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC068587.1-201ENST00000483613 781 ntBASIC4.87□□□□□ -1.63
CBX4O00257 SCARNA22-201ENST00000503991 125 ntBASIC4.87□□□□□ -1.63
CBX4O00257 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.87□□□□□ -1.63
CBX4O00257 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.87□□□□□ -1.63
CBX4O00257 RNA5SP249-201ENST00000516127 99 ntBASIC4.87□□□□□ -1.63
CBX4O00257 RNA5SP337-201ENST00000517007 109 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.87□□□□□ -1.63
CBX4O00257 AC022616.3-201ENST00000523940 148 ntBASIC4.87□□□□□ -1.63
CBX4O00257 MTND1P35-201ENST00000526739 508 ntBASIC4.87□□□□□ -1.63
CBX4O00257 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CBX4O00257 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX4O00257 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.87□□□□□ -1.63
CBX4O00257 AL121579.1-201ENST00000555129 305 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.87□□□□□ -1.63
CBX4O00257 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.87□□□□□ -1.63
CBX4O00257 CYCSP40-201ENST00000575927 294 ntBASIC4.87□□□□□ -1.63
CBX4O00257 COX6CP3-201ENST00000580869 223 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX4O00257 AL669831.4-202ENST00000590817 238 ntBASIC4.87□□□□□ -1.63
CBX4O00257 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.87□□□□□ -1.63
CBX4O00257 AC006272.2-201ENST00000594725 163 ntBASIC4.87□□□□□ -1.63
CBX4O00257 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC008966.2-201ENST00000606157 453 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC008536.2-201ENST00000607284 349 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC004908.2-201ENST00000609090 574 ntBASIC4.87□□□□□ -1.63
CBX4O00257 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX4O00257 AC105429.2-201ENST00000610567 517 ntBASIC4.87□□□□□ -1.63
CBX4O00257 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 uc_338.12-201ENST00000616344 181 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC009161.2-201ENST00000624626 138 ntBASIC4.87□□□□□ -1.63
CBX4O00257 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 AC138915.3-201ENST00000562908 1389 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC105074.1-201ENST00000623380 3095 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AL731532.2-201ENST00000623542 1953 ntBASIC4.87□□□□□ -1.63
CBX4O00257 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 SOCS5P3-201ENST00000425115 1576 ntBASIC4.87□□□□□ -1.63
CBX4O00257 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 AL592437.2-201ENST00000421655 2434 ntBASIC4.86□□□□□ -1.63
CBX4O00257 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 AL136164.3-201ENST00000624429 3978 ntBASIC4.86□□□□□ -1.63
CBX4O00257 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 AC009951.1-201ENST00000623674 2614 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AL590240.1-201ENST00000334118 313 ntBASIC4.86□□□□□ -1.63
CBX4O00257 Y_RNA.89-201ENST00000363031 102 ntBASIC4.86□□□□□ -1.63
CBX4O00257 RNU6-1078P-201ENST00000364522 103 ntBASIC4.86□□□□□ -1.63
CBX4O00257 RNU6-483P-201ENST00000384088 108 ntBASIC4.86□□□□□ -1.63
CBX4O00257 MIR298-201ENST00000401212 88 ntBASIC4.86□□□□□ -1.63
CBX4O00257 FGF7P8-201ENST00000402994 292 ntBASIC4.86□□□□□ -1.63
CBX4O00257 RPS3AP24-201ENST00000407896 734 ntBASIC4.86□□□□□ -1.63
CBX4O00257 RNU2-62P-201ENST00000410868 191 ntBASIC4.86□□□□□ -1.63
CBX4O00257 MTATP6P18-201ENST00000417994 673 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AC092832.1-201ENST00000422934 400 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AL645608.4-201ENST00000423619 154 ntBASIC4.86□□□□□ -1.63
CBX4O00257 FABP7P1-201ENST00000424004 391 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AC005517.2-201ENST00000424673 553 ntBASIC4.86□□□□□ -1.63
CBX4O00257 FTH1P1-201ENST00000437933 532 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AC016831.4-201ENST00000438302 307 ntBASIC4.86□□□□□ -1.63
CBX4O00257 HMGB3P12-201ENST00000438745 556 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX4O00257 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX4O00257 RPL7L1P1-201ENST00000448259 785 ntBASIC4.86□□□□□ -1.63
CBX4O00257 MTND3P10-201ENST00000450967 341 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX4O00257 AK3P4-201ENST00000504283 583 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX4O00257 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX4O00257 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX4O00257 RNU6-528P-201ENST00000516926 100 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX4O00257 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX4O00257 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.86□□□□□ -1.63
CBX4O00257 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX4O00257 AC087477.6-201ENST00000559595 843 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX4O00257 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX4O00257 MIR5096-201ENST00000583713 70 ntBASIC4.86□□□□□ -1.63
CBX4O00257 SLC25A36P1-201ENST00000590111 465 ntBASIC4.86□□□□□ -1.63
CBX4O00257 BNIP3P33-201ENST00000598912 569 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AC112230.1-201ENST00000604342 547 ntBASIC4.86□□□□□ -1.63
CBX4O00257 AC115621.1-201ENST00000604653 858 ntBASIC4.86□□□□□ -1.63
CBX4O00257 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CBX4O00257 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.86□□□□□ -1.63
CBX4O00257 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 LINC00622-201ENST00000562811 1570 ntBASIC4.86□□□□□ -1.63
CBX4O00257 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX4O00257 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CBX4O00257 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms