Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AC011155.1-201ENST00000316512 456 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 RNU6-744P-201ENST00000365557 107 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 RNU6-1316P-201ENST00000384242 108 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 RNU6-1297P-201ENST00000384415 104 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AL356057.3-201ENST00000402607 340 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 Y_RNA.615-201ENST00000410769 117 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AL354868.1-201ENST00000417077 482 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AL358176.2-201ENST00000425769 204 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 RPS27AP12-201ENST00000429552 465 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AL356276.2-201ENST00000435919 558 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AL035551.1-201ENST00000446931 348 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AC079168.2-201ENST00000453977 416 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AL590639.1-201ENST00000456484 337 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AC012123.2-201ENST00000485809 248 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AC107934.1-201ENST00000522215 217 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AC093249.4-201ENST00000564755 259 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AL627309.6-201ENST00000606857 840 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AL391813.2-201ENST00000609113 322 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 AC015908.5-201ENST00000623289 343 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 MTND4LP32-201ENST00000636111 270 ntBASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LOC102724428A0A0B4J2F2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.09□□□□□ -1.44
LOC102724428A0A0B4J2F2 AL731566.1-201ENST00000620490 1937 ntBASIC6.09□□□□□ -1.44
LOC102724428A0A0B4J2F2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC097063.1-201ENST00000426714 1797 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 OR14L1P-202ENST00000641545 3009 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC092447.10-201ENST00000620607 1652 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 RNU6-853P-201ENST00000364306 107 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 RNU6-996P-201ENST00000365438 107 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 SNORA22B-201ENST00000383876 138 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 SNORA37-201ENST00000384504 129 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 RNU6-831P-201ENST00000384548 107 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 RNU6-331P-201ENST00000384724 107 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AL031679.1-201ENST00000400616 525 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 RPL23AP15-201ENST00000450202 459 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AL356010.1-201ENST00000456364 102 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 CYCSP34-201ENST00000458172 304 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 RN7SL517P-201ENST00000462240 305 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 RPL36AP41-201ENST00000493820 306 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 TTC39CP1-201ENST00000512513 755 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 Y_RNA.719-201ENST00000517156 106 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC100784.1-201ENST00000522790 310 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC018630.1-201ENST00000541376 925 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC098848.2-201ENST00000588023 330 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 VN1R107P-201ENST00000601784 209 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 XIAPP1-201ENST00000603162 600 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 DPPA3P3-201ENST00000603842 430 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AP001330.4-201ENST00000604350 154 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AC090425.1-201ENST00000610007 140 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AL161637.1-201ENST00000622380 412 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 OR2L1P-202ENST00000641567 1023 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 AP000756.2-201ENST00000624168 2567 ntBASIC6.08□□□□□ -1.44
LOC102724428A0A0B4J2F2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 ZNF137P-201ENST00000456718 1920 ntBASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 AP001284.1-201ENST00000528393 2118 ntBASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
LOC102724428A0A0B4J2F2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms