Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DRB4X5D2U9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 RNU6-799P-201ENST00000363567 107 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 SNORA70.4-201ENST00000365509 134 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 DEFA7P-201ENST00000382676 285 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 SNORD21-201ENST00000383953 95 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 BX682237.1-201ENST00000415016 335 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC005189.1-201ENST00000431286 310 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 RPS20P5-201ENST00000434808 360 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 NANOGNBP1-201ENST00000448444 480 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC010285.1-201ENST00000470580 392 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AIG1P1-201ENST00000503376 148 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC026427.2-201ENST00000506228 536 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 MTCYBP37-201ENST00000510642 1133 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 RPL7L1P13-201ENST00000511702 739 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 SNORA9.3-201ENST00000516383 129 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 SCARNA13-201ENST00000516672 275 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 HMGB1P41-201ENST00000520234 440 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 HPRT1P3-201ENST00000539521 576 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC138761.3-201ENST00000579993 334 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AP001029.3-201ENST00000588063 596 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC093732.2-201ENST00000607950 274 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 ATP5A1P2-202ENST00000616464 443 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 AC020923.1-201ENST00000624021 917 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 PABPC1P7-201ENST00000413177 1513 ntBASIC2.12□□□□□ -2.07
HLA-DRB4X5D2U9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC022031.1-201ENST00000585985 2593 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC091564.4-201ENST00000533934 2194 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 MIR6073-201ENST00000352083 89 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 OR5H2-201ENST00000355273 945 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 MIR1250-201ENST00000408098 113 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 DUTP6-201ENST00000425573 462 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AL109741.2-201ENST00000455561 343 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AP002345.1-201ENST00000456493 928 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC009901.1-201ENST00000506703 541 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC113398.2-201ENST00000507630 558 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC010374.2-201ENST00000512933 535 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 SNORA31.15-201ENST00000516771 132 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC022080.3-201ENST00000544433 482 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 GTF2IP8-201ENST00000560687 584 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AL356575.1-201ENST00000603008 283 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC024153.1-201ENST00000603103 365 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC019159.1-201ENST00000605094 187 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 HSPE1P14-201ENST00000605812 302 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AC005021.1-201ENST00000608730 355 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 FRG1DP-201ENST00000635586 771 ntBASIC2.11□□□□□ -2.07
HLA-DRB4X5D2U9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 MIR26A1-201ENST00000362205 77 ntBASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 MIR491-201ENST00000384877 84 ntBASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 SNORA48.5-201ENST00000391143 135 ntBASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 AL121972.1-201ENST00000402023 252 ntBASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 AC092638.1-201ENST00000411966 1275 ntBASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 AL513043.1-201ENST00000439124 535 ntBASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 RPL37P4-201ENST00000448908 268 ntBASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DRB4X5D2U9 snoU13.22-201ENST00000459428 104 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms