Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 RPS3AP50-201ENST00000487064 803 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 RN7SL604P-201ENST00000492589 296 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC112206.3-201ENST00000514578 389 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 RNU1-6P-201ENST00000516290 144 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 RN7SKP96-201ENST00000516948 297 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 ZNF705CP-201ENST00000530515 889 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 OR4T1P-201ENST00000554933 911 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC068714.1-201ENST00000559623 800 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC084783.1-201ENST00000565846 910 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC093249.1-201ENST00000567049 203 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC115085.1-201ENST00000588924 229 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC090948.1-201ENST00000607464 549 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC011944.2-201ENST00000624440 683 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC006020.1-201ENST00000420179 1854 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC002525.1-201ENST00000624392 1622 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC004817.4-201ENST00000602396 3625 ntBASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCFC2Q9Y5Z7 TLK1P1-201ENST00000456760 2440 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 KPNA2P2-201ENST00000419546 1489 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 RNA5SP509-201ENST00000364577 119 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 Y_RNA.255-201ENST00000364581 97 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 SNORD42.2-201ENST00000365570 69 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 SNORA51.6-201ENST00000384151 125 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 RNU6-1160P-201ENST00000384546 104 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 MIR649-201ENST00000384843 97 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 ARF4P3-201ENST00000397387 509 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 PRRC2CP1-201ENST00000404428 159 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC127526.1-201ENST00000417526 366 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 BX276092.6-201ENST00000430476 250 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 BNIP3P2-201ENST00000441221 577 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 BX276092.8-201ENST00000455722 250 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 Y_RNA.639-201ENST00000458981 102 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 RNU7-63P-201ENST00000459054 62 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 MRPS17P3-201ENST00000465453 385 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 RPL21P6-201ENST00000479171 504 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 RPL23AP41-201ENST00000484754 458 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 NPM1P41-201ENST00000512920 831 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 RNU6-1314P-201ENST00000517139 104 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AP001781.1-201ENST00000530977 207 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 OR5BN1P-201ENST00000532955 829 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 CYCSP28-201ENST00000534284 321 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 BNIP3P6-201ENST00000549284 499 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 LARP7P2-201ENST00000575306 125 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 MIR4742-201ENST00000581069 85 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC008782.1-201ENST00000603386 430 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC104237.2-201ENST00000612456 443 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC243654.2-201ENST00000612843 443 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC090971.5-201ENST00000621102 293 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC090617.10-201ENST00000624308 134 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 AC063976.2-201ENST00000425667 3556 ntBASIC5.03□□□□□ -1.6
HCFC2Q9Y5Z7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HCFC2Q9Y5Z7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms