Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 BNIP3P23-201ENST00000599655 511 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AL445567.2-201ENST00000618935 498 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC124864.2-201ENST00000624736 186 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 MIR3653-201ENST00000625572 110 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 MIR3688-2-201ENST00000636963 87 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 Y_RNA.450-201ENST00000384198 113 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 FCF1P10-201ENST00000407590 479 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 SNORA11F-201ENST00000408237 128 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 OR2AH1P-201ENST00000425717 928 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 DYNLL1P7-201ENST00000429273 258 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 DHX9P1-201ENST00000436565 3076 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC073614.1-201ENST00000438690 650 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 RAB11AP1-201ENST00000442978 646 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AP001646.1-201ENST00000527936 915 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 MIR5697-201ENST00000578045 78 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC112187.2-201ENST00000604345 283 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC091965.4-201ENST00000607691 587 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC104458.1-201ENST00000608243 463 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 ZYXP1-201ENST00000617638 118 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AC091905.2-201ENST00000623143 306 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 FAM157B-203ENST00000639350 358 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 AL672167.1-205ENST00000641112 3080 ntBASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTDP1Q9Y5B0 ZNF33CP-201ENST00000432492 2030 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 GDI2P1-201ENST00000429312 1336 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 Y_RNA.70-201ENST00000362886 110 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 RNU1-83P-201ENST00000363426 164 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 SNORA72.1-201ENST00000363485 129 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 Y_RNA.296-201ENST00000364930 108 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 Y_RNA.372-201ENST00000365599 102 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 Y_RNA.453-201ENST00000384223 109 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AL590002.1-201ENST00000406554 418 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 RPS6P12-201ENST00000432491 726 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 MTCO3P18-201ENST00000440206 761 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 TDGF1P1-201ENST00000445734 527 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 MTND3P10-201ENST00000450967 341 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 RPL7AP28-201ENST00000464513 571 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 RN7SL41P-201ENST00000476144 297 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 HMGB1P36-201ENST00000487709 576 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC091167.1-201ENST00000492017 396 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC098799.2-201ENST00000509466 868 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC117522.1-201ENST00000509821 380 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC114781.4-201ENST00000513707 639 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 RNU6-150P-201ENST00000516237 95 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 RN7SKP21-201ENST00000516503 220 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 RNU6-430P-201ENST00000517078 107 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 OR4R3P-201ENST00000525084 838 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AP001180.3-201ENST00000582221 145 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC079587.1-201ENST00000603846 277 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms