Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC012005.1-201ENST00000624575 75 ntBASIC3.72□□□□□ -1.81
CTNNA3Q9UI47 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.72□□□□□ -1.81
CTNNA3Q9UI47 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNNA3Q9UI47 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNNA3Q9UI47 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.72□□□□□ -1.81
CTNNA3Q9UI47 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.72□□□□□ -1.81
CTNNA3Q9UI47 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.71□□□□□ -1.81
CTNNA3Q9UI47 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CTNNA3Q9UI47 AC002546.1-201ENST00000588041 2504 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 RNU6-1339P-201ENST00000363574 91 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 SNORD51.1-201ENST00000365405 77 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 ARF4P3-201ENST00000397387 509 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC110754.1-201ENST00000399740 601 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 RPL7P25-201ENST00000404151 721 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 RPS12P18-201ENST00000442381 270 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 RPS15AP1-201ENST00000457423 391 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC015724.1-201ENST00000478577 156 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC108860.1-201ENST00000484521 383 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC019227.1-201ENST00000526902 510 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 UBL5P2-201ENST00000583788 219 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AC103881.1-201ENST00000603476 538 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 SEC63P2-201ENST00000503863 1939 ntBASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.71□□□□□ -1.82
CTNNA3Q9UI47 MTCO1P18-201ENST00000455518 1419 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 U3.6-201ENST00000363622 211 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AL591034.1-201ENST00000407447 340 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 RNU4-65P-201ENST00000410473 140 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AC109780.2-201ENST00000413467 845 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 TATDN1P1-201ENST00000414123 891 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 RPS27P5-201ENST00000444247 244 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 GAPDHP27-201ENST00000447427 1020 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 RN7SL75P-201ENST00000461926 281 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AC097462.2-201ENST00000504623 481 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 RNA5SP385-201ENST00000515947 110 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 RNA5SP341-201ENST00000516261 117 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AC092470.1-201ENST00000546187 132 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 AP001029.3-201ENST00000588063 596 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CTNNA3Q9UI47 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 MTND5P19-201ENST00000424872 1794 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 NACA3P-201ENST00000359690 648 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 RN7SKP123-201ENST00000410732 291 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 OFD1P18Y-201ENST00000420889 959 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AC005189.1-201ENST00000431286 310 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 HMGB3P6-201ENST00000444896 598 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 RPL7P59-201ENST00000447700 943 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AC104108.1-201ENST00000509930 412 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 MTCO3P24-201ENST00000572729 782 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AC005951.1-201ENST00000576706 485 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 MIR4506-201ENST00000584693 77 ntBASIC3.69□□□□□ -1.82
CTNNA3Q9UI47 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms