Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MIR320B1-201ENST00000390209 79 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 RPL7P46-201ENST00000425129 740 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC063976.3-201ENST00000426849 329 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AL353898.1-201ENST00000444055 238 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 RPL31P50-201ENST00000471002 296 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 RN7SKP283-201ENST00000517197 270 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AP004242.1-201ENST00000533701 349 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC034268.2-201ENST00000571784 482 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 SNORD88.1-201ENST00000408684 91 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 RPL26P37-201ENST00000411983 438 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 RPL29P29-201ENST00000448725 423 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 HMGN1P8-201ENST00000463578 288 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 ATG10-AS1-201ENST00000504846 648 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC092435.3-201ENST00000565538 3654 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 MIR7973-1-201ENST00000614683 76 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC006378.2-201ENST00000623178 2476 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 DCAF13P1-201ENST00000495256 1330 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 SNORD62.1-201ENST00000362541 86 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 RSL24D1P4-201ENST00000400938 484 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC105402.1-201ENST00000413336 545 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AP000705.1-201ENST00000454567 350 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC089999.1-201ENST00000460336 374 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC126182.1-201ENST00000478134 357 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC093663.2-201ENST00000484625 313 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 MIR5092-201ENST00000583139 88 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC88CQ9P219 ABI1P1-201ENST00000603375 1120 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 AC087565.3-202ENST00000642085 1603 ntBASIC2.46□□□□□ -2.02
CCDC88CQ9P219 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 RNU6-564P-201ENST00000410983 104 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 COX6CP2-201ENST00000444980 225 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 AL590399.6-201ENST00000446396 307 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 C1DP3-201ENST00000455013 423 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 RN7SL429P-201ENST00000479090 223 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 RN7SL489P-201ENST00000486185 223 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 RN7SL327P-201ENST00000488659 223 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 MIR3124-201ENST00000582636 67 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC88CQ9P219 AC023043.3-201ENST00000593113 385 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 AP004372.1-201ENST00000604842 844 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 AC013412.1-201ENST00000610687 192 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 RN7SL853P-201ENST00000617250 223 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 DCAF13P3-201ENST00000561147 1334 ntBASIC2.45□□□□□ -2.02
CCDC88CQ9P219 FRG1BP-201ENST00000278882 761 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 RNU4-31P-201ENST00000384211 141 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 VN1R51P-201ENST00000411675 945 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 RPL30P3-201ENST00000424262 333 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 HMGB3P15-201ENST00000507326 574 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms