Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC092650.2-201ENST00000619984 902 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC099063.3-201ENST00000642066 185 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 MTND5P24-201ENST00000438892 1767 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 OR5BR1P-201ENST00000524992 1330 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC092104.1-201ENST00000497346 1441 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AL672167.1-206ENST00000356293 943 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-216P-201ENST00000363282 104 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-444P-201ENST00000383988 108 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 MIR124-3-201ENST00000384866 87 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 RPL5P32-201ENST00000454085 879 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 RPS3AP50-201ENST00000487064 803 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC110792.1-201ENST00000491826 472 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC010424.1-201ENST00000506336 297 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC108043.1-201ENST00000512696 574 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 MTCYBP43-201ENST00000513621 740 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 Y_RNA.695-201ENST00000516715 107 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 RN7SKP209-201ENST00000516888 304 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-352P-201ENST00000516908 107 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AP003033.1-201ENST00000527244 415 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AP000790.1-201ENST00000528891 737 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC008011.1-201ENST00000545989 227 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 SNORD39.3-201ENST00000584451 71 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC067852.4-201ENST00000590314 478 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC073544.2-201ENST00000601155 540 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 U73023.1-201ENST00000603134 700 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 MTCYBP22-201ENST00000603788 447 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AP001521.1-201ENST00000609150 300 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 C2orf27A-204ENST00000623058 969 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AL356266.1-201ENST00000623311 483 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 AC106871.1-201ENST00000568324 3102 ntBASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.95□□□□□ -1.78
SMARCAL1Q9NZC9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC025125.1-201ENST00000624743 1922 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 SPRR2C-201ENST00000290702 219 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC007685.1-201ENST00000329806 452 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 U3.4-201ENST00000363352 213 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 Y_RNA.302-201ENST00000364997 102 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AL121978.1-201ENST00000402778 359 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AL138878.1-201ENST00000405131 347 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 MIR1183-201ENST00000408856 89 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 RPS27AP12-201ENST00000429552 465 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AL353706.1-201ENST00000436728 494 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 MTND1P30-201ENST00000441241 901 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 MTCO3P11-201ENST00000455103 774 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC012170.1-201ENST00000495139 359 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC108078.3-201ENST00000502633 489 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 MTND4P2-201ENST00000507767 1203 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 MTCO3P7-201ENST00000510008 774 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 SOD1P3-201ENST00000518682 454 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms