Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 RNU6-228P-201ENST00000362700 106 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 RNU6-882P-201ENST00000391025 103 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 FTH1P6-201ENST00000430768 320 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AL078601.1-201ENST00000444542 271 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 FABP5P15-201ENST00000453566 214 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 RPS18P13-201ENST00000461260 454 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 RN7SL55P-201ENST00000464534 297 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 RN7SL308P-201ENST00000464971 297 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 RN7SL145P-201ENST00000469955 296 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 MIR4685-201ENST00000578185 69 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AC131238.1-201ENST00000617135 328 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AP000766.1-201ENST00000561746 4140 ntBASIC8.56□□□□□ -1.04
RNF216Q9NWF9 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF216Q9NWF9 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AC016251.2-201ENST00000623393 3089 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 RN7SKP208-201ENST00000365474 361 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 RNU1-11P-201ENST00000383975 164 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 NDUFS5P4-201ENST00000412983 318 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AC092421.1-201ENST00000448148 418 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AC097263.1-201ENST00000496795 606 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 RNU6-572P-201ENST00000516724 80 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 RNU2-12P-201ENST00000517216 168 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 EIF4A2P5-201ENST00000529914 499 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AC090241.1-201ENST00000587732 621 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AC000068.3-201ENST00000607934 427 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AC027309.3-201ENST00000623419 351 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 SNORA43.4-201ENST00000629559 138 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AC126773.4-201ENST00000612545 3043 ntBASIC8.55□□□□□ -1.04
RNF216Q9NWF9 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RNF216Q9NWF9 AP003119.3-201ENST00000566747 4192 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 AC116096.1-201ENST00000566804 2314 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 Y_RNA.85-201ENST00000363014 111 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 RN7SKP50-201ENST00000364694 315 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 RNA5SP79-201ENST00000365193 109 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 RNU6-136P-201ENST00000384663 107 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 RNU6-710P-201ENST00000410424 105 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 AC243964.1-201ENST00000441814 261 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 Y_RNA.690-201ENST00000516603 95 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 MTND6P19-201ENST00000519399 524 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 AC107016.1-201ENST00000550463 337 ntBASIC8.54□□□□□ -1.04
RNF216Q9NWF9 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.54□□□□□ -1.04
RNF216Q9NWF9 MIR5192-201ENST00000579892 92 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms