Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TRBV26-201ENST00000456572 344 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL109766.1-201ENST00000555080 552 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC099489.2-201ENST00000574976 260 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 MIR4330-201ENST00000579077 105 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 PRPF19P1-201ENST00000584766 898 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 uc_338.5-201ENST00000611839 155 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 DISC2.1-201ENST00000612827 205 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC093838.1-201ENST00000613014 469 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL049794.2-201ENST00000616301 365 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL603758.1-201ENST00000618654 241 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL022401.1-201ENST00000619498 108 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 NEAT1-202ENST00000501122 22743 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC079741.1-201ENST00000321498 212 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RN7SKP224-201ENST00000364140 325 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 SNORA75.4-201ENST00000391278 119 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RPL32P23-201ENST00000397237 405 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RPS4XP8-201ENST00000402039 771 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RNU2-8P-201ENST00000410727 190 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RNU6-373P-201ENST00000411247 98 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 GPM6BP2-201ENST00000432046 144 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RPS3AP54-201ENST00000435535 734 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 BRK1P2-201ENST00000442875 223 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 GPM6BP1-201ENST00000446387 144 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC000111.2-201ENST00000448200 210 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 OR1H1P-201ENST00000448731 937 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 SLC25A18P1-201ENST00000449385 454 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RNA5SP103-201ENST00000459503 118 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RPL7P15-201ENST00000461190 712 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AP000942.1-201ENST00000463969 747 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RN7SL738P-201ENST00000470264 297 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 HMGB1P21-201ENST00000502313 581 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RN7SKP276-201ENST00000516242 268 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 BTF3P12-201ENST00000519620 469 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC100784.1-201ENST00000522790 310 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC055876.1-202ENST00000567053 138 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RN7SL802P-201ENST00000577858 299 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RN7SL52P-201ENST00000584271 284 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AL512782.1-201ENST00000603093 364 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC113194.1-201ENST00000606037 500 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC008966.2-201ENST00000606157 453 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC078899.5-201ENST00000612475 178 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 MIR6780A-201ENST00000615089 68 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RN7SL722P-201ENST00000617780 284 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 RN7SL565P-201ENST00000618246 284 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC009248.2-201ENST00000619826 254 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC019206.1-201ENST00000621938 425 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 AC138649.5-201ENST00000637456 137 ntBASIC5.1□□□□□ -1.59
RNF38Q9H0F5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF38Q9H0F5 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms