Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU6-829P-201ENST00000363700 112 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 Y_RNA.264-201ENST00000364665 102 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 Y_RNA.443-201ENST00000384135 111 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 SNORA11B-201ENST00000408175 129 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AL161447.1-201ENST00000427811 230 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AC245517.3-201ENST00000440562 250 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AP000281.1-201ENST00000444036 316 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 SNORD4B-201ENST00000459083 72 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 RN7SL482P-201ENST00000487928 298 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 RN7SL242P-201ENST00000491451 297 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AC233724.2-201ENST00000515727 271 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU6-998P-201ENST00000515894 101 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 SNORA31.4-201ENST00000516049 129 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 IGHV3-50-201ENST00000522107 317 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AC105206.2-201ENST00000523556 515 ntTSL 2 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AC111188.3-201ENST00000604663 307 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AC092175.1-201ENST00000605325 200 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 WT1-AS_1.1-201ENST00000619639 109 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 MIR3199-2-201ENST00000636243 86 ntBASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 BTK-209ENST00000618050 2417 ntTSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 NLRP1-214ENST00000577119 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 SDAD1P1-202ENST00000524156 2051 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 AC062029.1-202ENST00000606164 3651 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 NOL8-201ENST00000358855 4422 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 LIN37-201ENST00000301159 1150 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 RNA5SP117-201ENST00000365294 118 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 Y_RNA.508-201ENST00000384502 114 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU6-1184P-201ENST00000384588 108 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 MIR522-201ENST00000385071 87 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 RPS26P47-201ENST00000427219 348 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 AC073073.1-201ENST00000493920 463 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 RN7SL252P-201ENST00000496274 297 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 AC134698.2-201ENST00000519172 311 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 TAGLN2P1-201ENST00000524097 587 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 AC103855.2-202ENST00000527642 568 ntTSL 4 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 RN7SL509P-201ENST00000579670 297 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 ZNF861P-201ENST00000588126 639 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 AC012493.2-201ENST00000595083 291 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 AC091810.1-201ENST00000603131 325 ntBASIC4.37□□□□□ -1.71
KRTAP3-3Q9BYR6 AC013412.1-201ENST00000610687 192 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms