Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 OR5D17P-201ENST00000531492 978 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 AC126118.1-201ENST00000607744 628 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL12A1Q99715 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
COL12A1Q99715 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL12A1Q99715 PTP4A1P7-201ENST00000423476 514 ntBASIC2.01□□□□□ -2.09
COL12A1Q99715 GTF2IP23-201ENST00000423746 351 ntBASIC2.01□□□□□ -2.09
COL12A1Q99715 AC009238.1-201ENST00000442165 424 ntBASIC2.01□□□□□ -2.09
COL12A1Q99715 AC009237.6-201ENST00000446969 424 ntBASIC2.01□□□□□ -2.09
COL12A1Q99715 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.01□□□□□ -2.09
COL12A1Q99715 AC008121.2-201ENST00000614647 523 ntBASIC2.01□□□□□ -2.09
COL12A1Q99715 NR1H5P-201ENST00000452683 1377 ntBASIC2.01□□□□□ -2.09
COL12A1Q99715 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL12A1Q99715 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.01□□□□□ -2.09
COL12A1Q99715 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.01□□□□□ -2.09
COL12A1Q99715 OR11H5P-202ENST00000641612 1325 ntBASIC2.01□□□□□ -2.09
COL12A1Q99715 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.01□□□□□ -2.09
COL12A1Q99715 RNU1-100P-201ENST00000365255 165 ntBASIC2.01□□□□□ -2.09
COL12A1Q99715 AL139156.1-201ENST00000412785 841 ntBASIC2.01□□□□□ -2.09
COL12A1Q99715 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.01□□□□□ -2.09
COL12A1Q99715 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.01□□□□□ -2.09
COL12A1Q99715 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL12A1Q99715 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2□□□□□ -2.09
COL12A1Q99715 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
COL12A1Q99715 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
COL12A1Q99715 MTCO1P22-201ENST00000604619 1360 ntBASIC2□□□□□ -2.09
COL12A1Q99715 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL12A1Q99715 RPS15AP28-201ENST00000435088 386 ntBASIC2□□□□□ -2.09
COL12A1Q99715 COX6CP2-201ENST00000444980 225 ntBASIC2□□□□□ -2.09
COL12A1Q99715 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2□□□□□ -2.09
COL12A1Q99715 VN1R17P-201ENST00000472048 1090 ntBASIC2□□□□□ -2.09
COL12A1Q99715 ALDH7A1P3-201ENST00000492517 345 ntBASIC2□□□□□ -2.09
COL12A1Q99715 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2□□□□□ -2.09
COL12A1Q99715 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2□□□□□ -2.09
COL12A1Q99715 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC2□□□□□ -2.09
COL12A1Q99715 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2□□□□□ -2.09
COL12A1Q99715 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL12A1Q99715 SNORA51.11-201ENST00000384442 131 ntBASIC2□□□□□ -2.09
COL12A1Q99715 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2□□□□□ -2.09
COL12A1Q99715 AL138878.1-201ENST00000405131 347 ntBASIC2□□□□□ -2.09
COL12A1Q99715 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2□□□□□ -2.09
COL12A1Q99715 RNU4-62P-201ENST00000410125 130 ntBASIC2□□□□□ -2.09
COL12A1Q99715 MTND4LP16-201ENST00000440828 295 ntBASIC2□□□□□ -2.09
COL12A1Q99715 CKS1BP7-201ENST00000522230 235 ntBASIC2□□□□□ -2.09
COL12A1Q99715 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2□□□□□ -2.09
COL12A1Q99715 AC025946.2-201ENST00000603398 234 ntBASIC2□□□□□ -2.09
COL12A1Q99715 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
COL12A1Q99715 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL12A1Q99715 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL12A1Q99715 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL12A1Q99715 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL12A1Q99715 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.99□□□□□ -2.09
COL12A1Q99715 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.99□□□□□ -2.09
COL12A1Q99715 RNU2-17P-201ENST00000410290 190 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 Z73417.1-201ENST00000447373 778 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 AC103968.1-201ENST00000557841 573 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.99□□□□□ -2.09
COL12A1Q99715 AC010872.1-201ENST00000624225 675 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL12A1Q99715 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.99□□□□□ -2.09
COL12A1Q99715 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
COL12A1Q99715 AC080125.1-201ENST00000414888 684 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL12A1Q99715 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.99□□□□□ -2.09
COL12A1Q99715 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.99□□□□□ -2.09
COL12A1Q99715 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL12A1Q99715 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
COL12A1Q99715 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL12A1Q99715 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
COL12A1Q99715 RNY1-201ENST00000364228 113 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 SNORD114-22-201ENST00000365423 72 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
COL12A1Q99715 AC009237.2-201ENST00000421358 284 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 RPL23AP76-201ENST00000441860 458 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.99□□□□□ -2.09
COL12A1Q99715 CCNHP1-201ENST00000513311 678 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.99□□□□□ -2.09
COL12A1Q99715 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.99□□□□□ -2.09
COL12A1Q99715 AC021269.2-201ENST00000532318 330 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.99□□□□□ -2.09
COL12A1Q99715 AC105137.2-201ENST00000569073 466 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.99□□□□□ -2.09
COL12A1Q99715 AC010378.1-201ENST00000619270 362 ntBASIC1.99□□□□□ -2.09
COL12A1Q99715 AC002543.1-201ENST00000299783 1954 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.98□□□□□ -2.09
COL12A1Q99715 SNORA41-201ENST00000384675 132 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 AL163540.1-201ENST00000485382 386 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 MIR4303-201ENST00000581299 66 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 AL450489.1-201ENST00000612071 468 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 GTF2H2B-203ENST00000508065 1432 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL12A1Q99715 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL12A1Q99715 AC026241.1-201ENST00000517873 2142 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 RAD1P1-201ENST00000231383 813 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 FRG1BP-201ENST00000278882 761 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 RPL31P1-201ENST00000398116 372 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 SNORA11.4-201ENST00000408823 129 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 MTCO2P17-201ENST00000424336 677 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 AL590399.6-201ENST00000446396 307 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms