Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 RPL23AP35-201ENST00000451906 501 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 MTCO3P11-201ENST00000455103 774 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 S100A11P2-201ENST00000467589 312 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 OR4G11P-201ENST00000492842 939 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AC104685.1-201ENST00000502445 371 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 HMGB1P28-201ENST00000507778 552 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 XKRY-201ENST00000510392 1100 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-678P-201ENST00000516832 109 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 ARL2BPP5-201ENST00000523141 481 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 MIR5680-201ENST00000577577 84 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AL445437.1-201ENST00000623157 3087 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AC107027.3-201ENST00000565095 3473 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC097504.1-201ENST00000515103 2415 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC005332.5-201ENST00000591222 2919 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-251P-201ENST00000363235 104 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-553P-201ENST00000364047 96 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-1122P-201ENST00000384449 107 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 RNU2-28P-201ENST00000410457 189 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC073136.2-201ENST00000417282 849 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 B3GNT2P1-201ENST00000434960 952 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 MTND4P32-201ENST00000437189 1237 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC105402.2-201ENST00000438503 358 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC010301.1-201ENST00000473936 355 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC021146.3-201ENST00000511911 260 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 SUMO2P20-201ENST00000520803 283 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 SLC2A13P1-201ENST00000531560 322 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC135628.1-201ENST00000568867 534 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC105129.3-201ENST00000605455 485 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 HSPE1P14-201ENST00000605812 302 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC091946.2-201ENST00000606105 291 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AC131238.1-201ENST00000617135 328 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AF246928.1-201ENST00000623768 87 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 AL445523.1-201ENST00000451184 1362 ntBASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.85□□□□□ -1.63
KRT28Q7Z3Y7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 ELL2P3-201ENST00000457883 1602 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AL390862.1-201ENST00000635467 1469 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 OR5BR1P-201ENST00000524992 1330 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 Y_RNA.560-201ENST00000384689 102 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 MIR1284-201ENST00000408337 120 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC023347.2-201ENST00000433994 462 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 Z75741.1-201ENST00000446793 314 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 MTND2P19-201ENST00000449129 1012 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 CCDC75P1-201ENST00000469247 791 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms